Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 2
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g081060.1.1 | Tomato | plastid | 93.51 | 96.86 |
| PGSC0003DMT400057423 | Potato | cytosol | 67.1 | 66.52 |
| KXG27212 | Sorghum | cytosol | 63.64 | 63.64 |
| Zm00001d002148_P002 | Maize | cytosol | 62.77 | 62.77 |
| Zm00001d050146_P001 | Maize | extracellular, mitochondrion | 62.34 | 62.34 |
| Os08t0277900-01 | Rice | plasma membrane | 61.9 | 61.64 |
| Os02t0119400-01 | Rice | plasma membrane | 60.61 | 60.34 |
| TraesCS5A01G062300.1 | Wheat | cytosol | 60.61 | 60.34 |
| TraesCS5B01G069400.1 | Wheat | cytosol | 60.61 | 60.34 |
| GSMUA_Achr6P34260_001 | Banana | cytosol | 60.17 | 59.66 |
| HORVU5Hr1G016680.2 | Barley | cytosol, vacuole | 60.61 | 57.85 |
| TraesCS6A01G059100.1 | Wheat | cytosol | 57.14 | 56.9 |
| TraesCS6B01G079400.1 | Wheat | cytosol | 56.28 | 56.03 |
| TraesCSU01G121500.1 | Wheat | cytosol | 55.84 | 55.6 |
| TraesCS5D01G073500.2 | Wheat | cytosol | 61.04 | 54.65 |
| HORVU4Hr1G023890.1 | Barley | cytosol | 17.75 | 47.67 |
| HORVU6Hr1G011180.1 | Barley | mitochondrion | 58.01 | 44.37 |
| PGSC0003DMT400033466 | Potato | endoplasmic reticulum | 49.78 | 42.91 |
| GSMUA_Achr9P03240_001 | Banana | cytosol | 63.64 | 30.12 |
Protein Annotations
| Gene3D:1.20.5.110 | EntrezGene:102583014 | MapMan:22.7.4.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000727 | UniProt:M1CPW2 | PFAM:PF05739 | EnsemblPlantsGene:PGSC0003DMG400028105 | PGSC:PGSC0003DMG400028105 |
| EnsemblPlants:PGSC0003DMT400072222 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF207 | SMART:SM00397 | SUPFAM:SSF58038 |
| TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000296D663 | RefSeq:XP_006339244.1 | RefSeq:XP_015165706.1 | SEG:seg |
Description
SNARE domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028105]
Coordinates
chr10:-:56848950..56855151
Molecular Weight (calculated)
26080.7 Da
IEP (calculated)
9.857
GRAVY (calculated)
-0.265
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSADSWMR EFNEASKLAD EVSSMISAKS SLPSSGPESQ RHLSAARRKI TILKTRLDTL QSLLQTLPSK QPLSKKEMKR RHDMLDNMIT KANQLATTLN
101: MNNLANRDSL LGPETKRPDV ISRATGLDNQ DLVGFQRQVI KEQDEDLDKL EETVISTKHV ALAINEELNL HTALLDNLDY HVDTTNSRLQ RVQRKLAFLN
201: KRTKGGCTWL CLLVIFIVIL AVVIFLLVKF L
101: MNNLANRDSL LGPETKRPDV ISRATGLDNQ DLVGFQRQVI KEQDEDLDKL EETVISTKHV ALAINEELNL HTALLDNLDY HVDTTNSRLQ RVQRKLAFLN
201: KRTKGGCTWL CLLVIFIVIL AVVIFLLVKF L
001: MASSSDSWMR AYNEALKLSE EINGMISERS SSAVTGPDAQ RRASAIRRKI TIFGNKLDSL QSLLAEIHGK PISEKEMNRR KDMVGNLRSK ANQMANALNM
101: SNFANRDSLL GPDIKPDDSM SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH VDVTDSRLRR VQKSLAVMNK
201: NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM
101: SNFANRDSLL GPDIKPDDSM SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH VDVTDSRLRR VQKSLAVMNK
201: NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM
Arabidopsis Description
SYP51SYP51 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.