Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041411 | Potato | nucleus, plastid | 66.57 | 84.53 |
| VIT_04s0008g06230.t01 | Wine grape | cytosol | 46.74 | 45.08 |
| KRH03572 | Soybean | nucleus | 41.78 | 41.26 |
| CDX80493 | Canola | cytosol | 33.85 | 38.18 |
| AT5G25270.1 | Thale cress | cytosol | 33.71 | 37.07 |
| VIT_11s0118g00660.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 36.69 | 36.89 |
| Bra009827.1-P | Field mustard | cytosol | 33.14 | 36.45 |
| CDX88166 | Canola | cytosol | 32.86 | 36.14 |
| Os08t0295100-00 | Rice | cytosol | 14.45 | 33.01 |
| Zm00001d001962_P014 | Maize | cytosol | 31.3 | 32.64 |
| GSMUA_Achr3P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 31.44 | 31.9 |
| KXG27341 | Sorghum | cytosol | 30.88 | 31.87 |
| TraesCS3B01G094400.5 | Wheat | cytosol | 31.02 | 31.6 |
| TraesCS3A01G079200.2 | Wheat | cytosol | 31.16 | 31.47 |
| TraesCS3D01G079600.2 | Wheat | cytosol | 31.16 | 31.34 |
| HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 31.44 | 29.25 |
| Os08t0295000-01 | Rice | cytosol | 3.54 | 21.01 |
| Solyc04g082160.2.1 | Tomato | nucleus | 25.5 | 21.0 |
Protein Annotations
| EnsemblPlants:Solyc06g036720.2.1 | EnsemblPlantsGene:Solyc06g036720.2 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR15204 | PANTHER:PTHR15204:SF3 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SEG:seg | SMART:SM00213 | SUPFAM:SSF54236 |
| UniParc:UPI0002766147 | UniProt:K4C537 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:27265542..27282417
Molecular Weight (calculated)
74297.7 Da
IEP (calculated)
4.734
GRAVY (calculated)
-0.456
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSNGAEDVQ ICGSGEAECP ETTVEIKIKM LDSQTYTLRV DKCVPVPALK EQIATVTGVL TEQQRLICRG KVLKDDQLLS AYHVEDGHTL HLVVRQPSSD
101: STPDPQATAS ASNAGYSQGN RVSPDMVVGT YSSSDHGDGI FPDLNRIVTA VLGSFGIASA GGGNEGIDLH GFGPASLGNI RDSGRSQTEQ ADTRDQSNVT
201: NSASARSTDV PPEALQAPVI PDSLTTLTQY LSHLTVEFRA NARGQSETTQ SAGVHLADRT ALEATAHSIG ERGFPTPASL AEVIILTRQL FMEQVVECLS
301: QFSTLLENQA NVTNPGERMR IQSYALRTGG LFRNIGAMLL ELGRTAMTLR MGETPADAVV NAGPAVFVST AGPNPIMVQP LPFQPNTSFG AVSVGTVQNN
401: TGFSGGSVSS GFIPRNIDIR IRTGSFMASN PNRREPAGGP QQPGQAGQAA SIGGSSDQQN TGGSRSSSAR ESAVRVVPIR TVVTAVPASI GRSTSDSVRN
501: PMGIFYPVLA RVQHVSSGNS NSSGASQESD QNNLHGIDTR DPANPDSAGQ QQNAGLPSVE GNFSSFSEAS NGDEFSAQYQ SSVDQLLRSL FSGESIHPEN
601: VNDRGVSMNS SSGDGVEAEN NSNSQGTEAA RDDGVFLSNI LRHIMPIISE TNGTSSANLP SERSNMAEDG SDGRQTQAQE NTENASSSHE RRDPPLPPSS
701: KRQKGE
101: STPDPQATAS ASNAGYSQGN RVSPDMVVGT YSSSDHGDGI FPDLNRIVTA VLGSFGIASA GGGNEGIDLH GFGPASLGNI RDSGRSQTEQ ADTRDQSNVT
201: NSASARSTDV PPEALQAPVI PDSLTTLTQY LSHLTVEFRA NARGQSETTQ SAGVHLADRT ALEATAHSIG ERGFPTPASL AEVIILTRQL FMEQVVECLS
301: QFSTLLENQA NVTNPGERMR IQSYALRTGG LFRNIGAMLL ELGRTAMTLR MGETPADAVV NAGPAVFVST AGPNPIMVQP LPFQPNTSFG AVSVGTVQNN
401: TGFSGGSVSS GFIPRNIDIR IRTGSFMASN PNRREPAGGP QQPGQAGQAA SIGGSSDQQN TGGSRSSSAR ESAVRVVPIR TVVTAVPASI GRSTSDSVRN
501: PMGIFYPVLA RVQHVSSGNS NSSGASQESD QNNLHGIDTR DPANPDSAGQ QQNAGLPSVE GNFSSFSEAS NGDEFSAQYQ SSVDQLLRSL FSGESIHPEN
601: VNDRGVSMNS SSGDGVEAEN NSNSQGTEAA RDDGVFLSNI LRHIMPIISE TNGTSSANLP SERSNMAEDG SDGRQTQAQE NTENASSSHE RRDPPLPPSS
701: KRQKGE
001: MGDNGKDEIM VEASQCAGAM VEIKIKTLDS QTYTLRVDKC VPVPALKEQV ASVTGVVTEQ QRLICRGKVM KDDQLLSAYH VEDGHTLHLV VRQPVSESST
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
Arabidopsis Description
Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT5G25270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.