Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0118g00660.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 41.96 | 42.73 |
| Solyc06g036720.2.1 | Tomato | nucleus | 41.26 | 41.78 |
| CDX80493 | Canola | cytosol | 31.75 | 36.26 |
| PGSC0003DMT400041411 | Potato | nucleus, plastid | 27.97 | 35.97 |
| Zm00001d001962_P014 | Maize | cytosol | 33.85 | 35.75 |
| AT5G25270.1 | Thale cress | cytosol | 32.03 | 35.67 |
| Os08t0295100-00 | Rice | cytosol | 15.38 | 35.6 |
| Bra009827.1-P | Field mustard | cytosol | 31.47 | 35.05 |
| CDX88166 | Canola | cytosol | 31.33 | 34.89 |
| KXG27341 | Sorghum | cytosol | 33.01 | 34.5 |
| TraesCS3B01G094400.5 | Wheat | cytosol | 31.05 | 32.03 |
| GSMUA_Achr3P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 31.05 | 31.9 |
| TraesCS3A01G079200.2 | Wheat | cytosol | 31.05 | 31.76 |
| TraesCS3D01G079600.2 | Wheat | cytosol | 31.05 | 31.62 |
| PGSC0003DMT400041410 | Potato | cytosol | 16.5 | 31.22 |
| HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 31.61 | 29.78 |
| Os08t0295000-01 | Rice | cytosol | 3.22 | 19.33 |
| KRH17506 | Soybean | nucleus | 25.17 | 19.23 |
| KRH06004 | Soybean | nucleus | 24.9 | 18.94 |
Protein Annotations
| EntrezGene:100783070 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02010352 | EnsemblPlantsGene:GLYMA_17G106000 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1MU01 | InterPro:IPR000626 | EnsemblPlants:KRH03572 | ProteinID:KRH03572 |
| ProteinID:KRH03572.1 | ProteinID:KRH03573.1 | PFAM:PF00240 | PRINTS:PR00348 | PFscan:PS50053 | PANTHER:PTHR15204 |
| PANTHER:PTHR15204:SF3 | SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI00023D52EA | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:8311505..8318423
Molecular Weight (calculated)
75916.5 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.415
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTEKIPIS AESSETTIEI KIKTLDSQTY TLRVDKQMPV PALKEQIASV TGVLSERQRL ICQGKVLKDD QLLSAYHVED GHTLHLVVRQ PDLPPPGSVS
101: NHSVTELNSS TGLGHASQVA PGVFIETFNV PVQGDGVAPE INRIVSAILG SIGLPNFASG SEGGIDVREH DSQGSGRTLG SSGILDSSHP RPEQAGLRIL
201: SDRLRNTFGT PAPVSLGSLQ PPVIPDSLTT LSQYLRHISL EFDAIVREGR DNAEAAEAQR NEETRSVSSH LGSTPEGLSS PASLAEVLRS TRQMIDQQAG
301: ECLLQLSGQL ENQANVTDPL LRSSIQSRAL RTGVLFYNLG AFLLELGRTT MTLRLGQTSS EAVVNGGPAV FISPNGPNHI MVQPLPFQPG ASFGAVPVGA
401: AQSNSSLGSG LGSSFFPRRI DIQIRRGTST TSSNTNQEER NETQSASVQR NSGESSVNQA TSRRPDASIA GEPGVRLVPI RTMVAAAVPG TLGRLPSESS
501: GNSIGLYYPI LGRFQHVSSG HSNSEQGSQQ SSQHHTVLPS TPESILQRQN TEDSARNVGS LSTPSTRQEP SSSRVVNINI LAASGPQNNQ ESERQIPSSV
601: LQFLRTFFPG GEIHVEDSSV QGTTAGSALD HAATSRGAAP VPEAQPNVSE EGIFLSNILR EIMPVISQQV GSEGNPSEDH MAQDSSTQVE TDVGTSRRQS
701: DSDPSPPNAK RQKME
101: NHSVTELNSS TGLGHASQVA PGVFIETFNV PVQGDGVAPE INRIVSAILG SIGLPNFASG SEGGIDVREH DSQGSGRTLG SSGILDSSHP RPEQAGLRIL
201: SDRLRNTFGT PAPVSLGSLQ PPVIPDSLTT LSQYLRHISL EFDAIVREGR DNAEAAEAQR NEETRSVSSH LGSTPEGLSS PASLAEVLRS TRQMIDQQAG
301: ECLLQLSGQL ENQANVTDPL LRSSIQSRAL RTGVLFYNLG AFLLELGRTT MTLRLGQTSS EAVVNGGPAV FISPNGPNHI MVQPLPFQPG ASFGAVPVGA
401: AQSNSSLGSG LGSSFFPRRI DIQIRRGTST TSSNTNQEER NETQSASVQR NSGESSVNQA TSRRPDASIA GEPGVRLVPI RTMVAAAVPG TLGRLPSESS
501: GNSIGLYYPI LGRFQHVSSG HSNSEQGSQQ SSQHHTVLPS TPESILQRQN TEDSARNVGS LSTPSTRQEP SSSRVVNINI LAASGPQNNQ ESERQIPSSV
601: LQFLRTFFPG GEIHVEDSSV QGTTAGSALD HAATSRGAAP VPEAQPNVSE EGIFLSNILR EIMPVISQQV GSEGNPSEDH MAQDSSTQVE TDVGTSRRQS
701: DSDPSPPNAK RQKME
001: MGDNGKDEIM VEASQCAGAM VEIKIKTLDS QTYTLRVDKC VPVPALKEQV ASVTGVVTEQ QRLICRGKVM KDDQLLSAYH VEDGHTLHLV VRQPVSESST
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
Arabidopsis Description
Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT5G25270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.