Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03572 | Soybean | nucleus | 42.73 | 41.96 |
| VIT_04s0008g06230.t01 | Wine grape | cytosol | 41.17 | 39.48 |
| Solyc06g036720.2.1 | Tomato | nucleus | 36.89 | 36.69 |
| Os08t0295100-00 | Rice | cytosol | 15.1 | 34.3 |
| CDX80493 | Canola | cytosol | 28.49 | 31.95 |
| Zm00001d001962_P014 | Maize | cytosol | 30.77 | 31.91 |
| KXG27341 | Sorghum | cytosol | 31.05 | 31.87 |
| PGSC0003DMT400041411 | Potato | nucleus, plastid | 24.5 | 30.94 |
| GSMUA_Achr3P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 30.63 | 30.89 |
| Bra009827.1-P | Field mustard | cytosol | 28.21 | 30.84 |
| CDX88166 | Canola | cytosol | 28.06 | 30.69 |
| AT5G25270.1 | Thale cress | cytosol | 28.06 | 30.69 |
| TraesCS3A01G079200.2 | Wheat | cytosol | 30.06 | 30.19 |
| TraesCS3B01G094400.5 | Wheat | cytosol | 29.77 | 30.16 |
| TraesCS3D01G079600.2 | Wheat | cytosol | 30.06 | 30.06 |
| HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 30.34 | 28.06 |
| PGSC0003DMT400041410 | Potato | cytosol | 14.53 | 26.98 |
| Os08t0295000-01 | Rice | cytosol | 3.7 | 21.85 |
| VIT_09s0054g01880.t01 | Wine grape | nucleus | 22.65 | 16.83 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | ProteinID:CCB49929 | ProteinID:CCB49929.1 | ncoils:Coil | UniProt:F6HCI3 |
| EMBL:FN595515 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000626 | PFAM:PF00240 |
| PRINTS:PR00348 | PFscan:PS50053 | PANTHER:PTHR15204 | PANTHER:PTHR15204:SF3 | SMART:SM00213 | SUPFAM:SSF54236 |
| SignalP:SignalP-noTM | TIGR:TC68999 | UniParc:UPI0002108D6A | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom |
| ArrayExpress:VIT_11s0118g00660 | EnsemblPlantsGene:VIT_11s0118g00660 | EnsemblPlants:VIT_11s0118g00660.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:6433123..6446759
Molecular Weight (calculated)
74718.9 Da
IEP (calculated)
4.757
GRAVY (calculated)
-0.329
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTILLEMIV LYTSWQVLHC LRTMGCTAED PMAGGKENEI EIKIKTLDSQ TYTMRVNKQV PVPDLKQQIA TVTGVLSDQQ RLICRGKVLK DDQRLCAYHV
101: EDGHTLHLVT RQPVPPSSEG SHNQSDAIPG LGMSHGQDNQ VAPGFLPENL NVPNQGDAIP PEINQLVSAV LGAFGVNDIG GNQGPDARVN FYISGLTQSN
201: SAFALAVSLG ALSPLVVPDS LTTLSQYLSR LRREFGRGNG NNVQTADIHG TAERESNSIL HSVTAPGLTP TASLAELMLS ARQMLIEQVG ESLLQLQRQL
301: ENQETATNLS ERRDIQFSAG RTGVLLQNVG AFLLELGRTT MTLIMGQMPS EAMVNTGPAL FISPSGPNPL MVQAQPFQPG TSFGSFSTGT AQPGSGLVNG
401: FGFLPRRIDI QIRRGSSMVT PNVNQVEHGY TNQPSGQRNP VTSSGGENPA TSLVSEGSSI AAVPMRSMLG AVSGPFNSVL SDPSSGLLGL YPVLGRLQHV
501: GSGHAIDELG SQASGEHQAT GFQTEQLNEG GRTTEGSLPT PSLRHLAPSE SQNFRINLQS TNGTITNPEA EGHMPSSVLQ FLRTMFAGGE IEHVEDFNSQ
601: GIATNPVTEH SEAAAGAMDA QQAEPEVTDE GIFLSNMLRE MMRFISQDVD PNVAPPEGSS ASEHGTDSSS QAESSVAGTL RRESDNQASP PNSKRQKMDD
701: SS
101: EDGHTLHLVT RQPVPPSSEG SHNQSDAIPG LGMSHGQDNQ VAPGFLPENL NVPNQGDAIP PEINQLVSAV LGAFGVNDIG GNQGPDARVN FYISGLTQSN
201: SAFALAVSLG ALSPLVVPDS LTTLSQYLSR LRREFGRGNG NNVQTADIHG TAERESNSIL HSVTAPGLTP TASLAELMLS ARQMLIEQVG ESLLQLQRQL
301: ENQETATNLS ERRDIQFSAG RTGVLLQNVG AFLLELGRTT MTLIMGQMPS EAMVNTGPAL FISPSGPNPL MVQAQPFQPG TSFGSFSTGT AQPGSGLVNG
401: FGFLPRRIDI QIRRGSSMVT PNVNQVEHGY TNQPSGQRNP VTSSGGENPA TSLVSEGSSI AAVPMRSMLG AVSGPFNSVL SDPSSGLLGL YPVLGRLQHV
501: GSGHAIDELG SQASGEHQAT GFQTEQLNEG GRTTEGSLPT PSLRHLAPSE SQNFRINLQS TNGTITNPEA EGHMPSSVLQ FLRTMFAGGE IEHVEDFNSQ
601: GIATNPVTEH SEAAAGAMDA QQAEPEVTDE GIFLSNMLRE MMRFISQDVD PNVAPPEGSS ASEHGTDSSS QAESSVAGTL RRESDNQASP PNSKRQKMDD
701: SS
001: MGDNGKDEIM VEASQCAGAM VEIKIKTLDS QTYTLRVDKC VPVPALKEQV ASVTGVVTEQ QRLICRGKVM KDDQLLSAYH VEDGHTLHLV VRQPVSESST
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
Arabidopsis Description
Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT5G25270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.