Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27341 | Sorghum | cytosol | 89.07 | 88.16 |
| TraesCS3B01G094400.5 | Wheat | cytosol | 61.89 | 60.46 |
| TraesCS3A01G079200.2 | Wheat | cytosol | 61.89 | 59.94 |
| TraesCS3D01G079600.2 | Wheat | cytosol | 61.45 | 59.26 |
| Os08t0295000-01 | Rice | cytosol | 10.34 | 58.82 |
| HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 62.04 | 55.34 |
| Os08t0295100-00 | Rice | cytosol | 23.19 | 50.81 |
| KRH03572 | Soybean | nucleus | 35.75 | 33.85 |
| VIT_04s0008g06230.t01 | Wine grape | cytosol | 36.04 | 33.33 |
| GSMUA_Achr3P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 33.38 | 32.47 |
| Solyc06g036720.2.1 | Tomato | nucleus | 32.64 | 31.3 |
| AT5G25270.1 | Thale cress | cytosol | 29.39 | 31.0 |
| CDX80493 | Canola | cytosol | 28.66 | 30.99 |
| VIT_11s0118g00660.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 31.91 | 30.77 |
| Bra009827.1-P | Field mustard | cytosol | 28.51 | 30.06 |
| CDX88166 | Canola | cytosol | 28.36 | 29.91 |
| PGSC0003DMT400041411 | Potato | nucleus, plastid | 22.16 | 26.98 |
| PGSC0003DMT400041410 | Potato | cytosol | 12.85 | 23.02 |
| Zm00001d052721_P001 | Maize | plasma membrane | 19.94 | 14.92 |
Protein Annotations
| EnsemblPlants:Zm00001d001962_P014 | EnsemblPlants:Zm00001d001962_T014 | EnsemblPlantsGene:Zm00001d001962 | EntrezGene:100384859 | Gene3D:3.10.20.90 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000626 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR15204 |
| PANTHER:PTHR15204:SF3 | PFAM:PF00240 | PFscan:PS50053 | ProteinID:ONM12569.1 | ProteinID:ONM12582.1 | SEG:seg |
| SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI00022176AB | UniProt:A0A1D6DUU8 | MapMan:35.1 | : |
Description
Ubiquitin-like superfamily protein
Coordinates
chr2:+:3572242..3587792
Molecular Weight (calculated)
71874.5 Da
IEP (calculated)
5.351
GRAVY (calculated)
-0.470
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MESASDVQMQ HRAEDSETTI EIKIKTLDSQ TYNLRVNKCV PVPLLKEKIA TVTGILSEQQ RLICRGRVLK DDELLSAYHV EDGHTLHLVV RHPGQSATFG
101: NAATEANTSN SGRRHGPTVA RSVVLEAVNV DPGSSELPAF VAQILQSVLG TINAQSTGTP TSSDTGSLDP SQSSIPNTIR VELDQQQAPL LFQSEPAHES
201: SQPNVIPDAL TTMSQYINFM RDSFRREGFS LNGQTEGNVE NRTAEPESAS VLGLHNASLL AENMHSTRQI IVEQAGALLS QLSTQLGDLE NVTDSAIRRD
301: IQSSAVRTGS LFQNLGSLLL ELGRTTMLLR INPSSSEAVV NSGPALYISP SGPNPLMVQP VPFPGRSVQM GTLFSSLGSQ GSVLHPRDVD IHVRTSGSVP
401: GASTNPSDSA GAQAHQNVNR PGDASHANIG EAFSGVAGGT PFSVESGVRL LPLRTVVAMP AGISRAPSGS SSGGLGIIYP FLTRVRQRAN TNGNDERNGQ
501: SPNESARSST HLNQQSIPQS SQTHEAGNLR SPVDVNVGDG SETSPGQQNG LVTLSQIMDF FGSMLPGENV RGNTSSQQPP MASTEQGEGR NLATPEVSGA
601: SEEALRFAGM VRQIMPFISQ VETQNQSAPP DSSSTPAQAA SGSADRARDV PNDSTSSRQH NRDQIDEPNS KRQRTSD
101: NAATEANTSN SGRRHGPTVA RSVVLEAVNV DPGSSELPAF VAQILQSVLG TINAQSTGTP TSSDTGSLDP SQSSIPNTIR VELDQQQAPL LFQSEPAHES
201: SQPNVIPDAL TTMSQYINFM RDSFRREGFS LNGQTEGNVE NRTAEPESAS VLGLHNASLL AENMHSTRQI IVEQAGALLS QLSTQLGDLE NVTDSAIRRD
301: IQSSAVRTGS LFQNLGSLLL ELGRTTMLLR INPSSSEAVV NSGPALYISP SGPNPLMVQP VPFPGRSVQM GTLFSSLGSQ GSVLHPRDVD IHVRTSGSVP
401: GASTNPSDSA GAQAHQNVNR PGDASHANIG EAFSGVAGGT PFSVESGVRL LPLRTVVAMP AGISRAPSGS SSGGLGIIYP FLTRVRQRAN TNGNDERNGQ
501: SPNESARSST HLNQQSIPQS SQTHEAGNLR SPVDVNVGDG SETSPGQQNG LVTLSQIMDF FGSMLPGENV RGNTSSQQPP MASTEQGEGR NLATPEVSGA
601: SEEALRFAGM VRQIMPFISQ VETQNQSAPP DSSSTPAQAA SGSADRARDV PNDSTSSRQH NRDQIDEPNS KRQRTSD
001: MGDNGKDEIM VEASQCAGAM VEIKIKTLDS QTYTLRVDKC VPVPALKEQV ASVTGVVTEQ QRLICRGKVM KDDQLLSAYH VEDGHTLHLV VRQPVSESST
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
Arabidopsis Description
Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT5G25270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.