Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001962_P014 | Maize | cytosol | 88.16 | 89.07 |
| TraesCS3B01G094400.5 | Wheat | cytosol | 63.16 | 62.34 |
| TraesCS3A01G079200.2 | Wheat | cytosol | 62.87 | 61.52 |
| TraesCS3D01G079600.2 | Wheat | cytosol | 62.57 | 60.97 |
| HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 63.16 | 56.92 |
| Os08t0295000-01 | Rice | cytosol | 9.65 | 55.46 |
| Os08t0295100-00 | Rice | cytosol | 24.12 | 53.4 |
| VIT_04s0008g06230.t01 | Wine grape | cytosol | 36.4 | 34.02 |
| GSMUA_Achr3P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 33.77 | 33.19 |
| KRH03572 | Soybean | nucleus | 34.5 | 33.01 |
| VIT_11s0118g00660.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 31.87 | 31.05 |
| Solyc06g036720.2.1 | Tomato | nucleus | 31.87 | 30.88 |
| AT5G25270.1 | Thale cress | cytosol | 28.95 | 30.84 |
| CDX80493 | Canola | cytosol | 28.07 | 30.67 |
| Bra009827.1-P | Field mustard | cytosol | 27.92 | 29.75 |
| CDX88166 | Canola | cytosol | 27.78 | 29.59 |
| PGSC0003DMT400041411 | Potato | nucleus, plastid | 21.2 | 26.08 |
| PGSC0003DMT400041410 | Potato | cytosol | 12.57 | 22.75 |
| KXG25466 | Sorghum | nucleus | 23.83 | 17.21 |
Protein Annotations
| EnsemblPlants:KXG27341 | EnsemblPlantsGene:SORBI_3006G252900 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR15204 | PANTHER:PTHR15204:SF3 | PFAM:PF00240 |
| PFscan:PS50053 | ProteinID:KXG27340.1 | ProteinID:KXG27341 | ProteinID:KXG27341.1 | SEG:seg | SMART:SM00213 |
| SUPFAM:SSF54236 | UniParc:UPI00081AB334 | UniProt:A0A1B6PNU9 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:59069060..59079223
Molecular Weight (calculated)
72356.0 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.475
Length
684 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSDVQMQH CAEDSETTIE IKIKTLDSQT YNLRVNKCVP VPLLKEKIAT VTGILSEQQR LICRGRVLKD DELLSAYHVE DGHTLHLVVR HPGQSATSGN
101: AATEANTSNS GRRRGPTVAR SVVLEAVNVD PGSSELPAFV AQILQSVLGT INAQSSGTPA SSDTRPSDPA QSSIPNTVRV ELDQQQAPLL FQSEPAHESS
201: QPNVIPDALT TMSQYIDFMR DSFRREGFNL NGQTEDNVEN RTAGSTTSVG GTQNQESQPE SAALGLHNAS LLAENMHSTR QIVVEQAGAL LSQLSAQLGD
301: LENVTDPATR RDIQNSAVRV GSLLQNLGSL LLELGRTTML LRINPSSSEA VVNSGPALYI SPSGPNPLMV QPVPFPGRSV QMGTLFSSLG SQGSVLHPRD
401: VDIHVRTSGS VPGANPSESA GAQAHQNVNR PGDASHANIG EAFSGVAGVT PFSVESGVRL LPLRTVVAMP AGISRAPSGS SSGGVGIIYP FLTRVRQRAN
501: TNGNDERNGQ SQNEPARSST HPNQQSIPQT SQTHEAGNLG SPVDVNVGDG SETSPGNGLV TLSQIMDFLG SMLPGENVRG NTSSQQSPLA STEQGEGRNL
601: ATPQVSGASE EALRFASMVR QIMPFISQVE TQNLNAPPDS SSTPAQAASG SSDRARDVPD DSSSRQHNRD QIDEPNSKRQ RTSD
101: AATEANTSNS GRRRGPTVAR SVVLEAVNVD PGSSELPAFV AQILQSVLGT INAQSSGTPA SSDTRPSDPA QSSIPNTVRV ELDQQQAPLL FQSEPAHESS
201: QPNVIPDALT TMSQYIDFMR DSFRREGFNL NGQTEDNVEN RTAGSTTSVG GTQNQESQPE SAALGLHNAS LLAENMHSTR QIVVEQAGAL LSQLSAQLGD
301: LENVTDPATR RDIQNSAVRV GSLLQNLGSL LLELGRTTML LRINPSSSEA VVNSGPALYI SPSGPNPLMV QPVPFPGRSV QMGTLFSSLG SQGSVLHPRD
401: VDIHVRTSGS VPGANPSESA GAQAHQNVNR PGDASHANIG EAFSGVAGVT PFSVESGVRL LPLRTVVAMP AGISRAPSGS SSGGVGIIYP FLTRVRQRAN
501: TNGNDERNGQ SQNEPARSST HPNQQSIPQT SQTHEAGNLG SPVDVNVGDG SETSPGNGLV TLSQIMDFLG SMLPGENVRG NTSSQQSPLA STEQGEGRNL
601: ATPQVSGASE EALRFASMVR QIMPFISQVE TQNLNAPPDS SSTPAQAASG SSDRARDVPD DSSSRQHNRD QIDEPNSKRQ RTSD
001: MGDNGKDEIM VEASQCAGAM VEIKIKTLDS QTYTLRVDKC VPVPALKEQV ASVTGVVTEQ QRLICRGKVM KDDQLLSAYH VEDGHTLHLV VRQPVSESST
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
101: SNAAADPALS AGDSQGSQRS RVVVGSFNIA EQADGVYSDL GQIVSAVLGS LGISNPEGGI EGIDDMGPLH ERLSRSSGPG TARDSSGGRS ATPNAVDQTS
201: TPLASSQPAA IPDSLTTLSE YLNHLRQEFA ANGSNANNLQ DSENSVGNVQ DSASTTGESR IPRPSHLAEV LQSTRQLLIG EVADCLSNLS RQLVDHVNVT
301: DPPTRRLCQS NMLQSGSLLE SLGISLLELG RATMMLRLGQ TPDDAVVDAG PAVFISPTGR NPLPSHSSRL GTSIGSLQAG TAHSNPFAGQ SLASAPRNIE
401: IRIRTGSWVP ASGTNQREES TTQQTPGQTI PSTPSSTTDP APSTRGPSEP LRNPVALVIP VVARYQQISL GGRSSTGLDG VHQPVTESSR QPQSVGTPGR
501: EGDSSASPGG RGLSELRNRI HQFLRPLSRR ENQAGSTESQ GAANPSATAS TETNEAVANA QVEPATTTDE GNFISSVLQQ IMPFISQNVA SSSSGEAATG
601: RGSNSRQASS REAEEEEGTE RGNSTRRPEP PSPPESKRQR RE
Arabidopsis Description
Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT5G25270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.