Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0876500-01 | Rice | cytosol, nucleus, plastid | 50.98 | 52.0 |
| HORVU7Hr1G045920.2 | Barley | extracellular, nucleus | 47.06 | 47.06 |
| Solyc11g039950.1.1 | Tomato | nucleus | 63.73 | 36.72 |
| CDX99527 | Canola | nucleus | 59.8 | 36.09 |
| GSMUA_Achr5P01350_001 | Banana | cytosol | 56.86 | 36.02 |
| CDX86873 | Canola | nucleus | 55.88 | 34.97 |
| Bra037907.1-P | Field mustard | nucleus | 55.88 | 34.76 |
| AT4G10110.1 | Thale cress | nucleus | 55.88 | 32.95 |
| TraesCS1A01G267300.1 | Wheat | nucleus | 52.94 | 28.88 |
| TraesCS3D01G379900.1 | Wheat | cytosol, nucleus, plastid | 57.84 | 28.78 |
| TraesCS3B01G419000.1 | Wheat | nucleus | 57.84 | 28.78 |
| TraesCS1D01G267400.2 | Wheat | nucleus | 52.94 | 28.57 |
| TraesCS1B01G278200.2 | Wheat | nucleus | 52.94 | 28.57 |
| HORVU1Hr1G065440.3 | Barley | nucleus | 51.96 | 28.04 |
| Zm00001d038248_P002 | Maize | cytosol | 50.0 | 27.87 |
| Zm00001d042642_P002 | Maize | nucleus | 46.08 | 27.81 |
| Os05t0427300-03 | Rice | nucleus | 50.98 | 27.81 |
| TraesCS3A01G389800.1 | Wheat | cytosol | 55.88 | 27.8 |
| KXG22055 | Sorghum | nucleus | 50.98 | 27.37 |
| Zm00001d010213_P001 | Maize | extracellular, nucleus | 50.98 | 27.23 |
| HORVU1Hr1G065390.1 | Barley | mitochondrion | 51.96 | 23.56 |
| HORVU1Hr1G055970.27 | Barley | mitochondrion | 46.08 | 22.71 |
| Zm00001d012239_P003 | Maize | nucleus | 50.0 | 10.94 |
| OQU87973 | Sorghum | nucleus | 49.02 | 10.57 |
Protein Annotations
| EnsemblPlants:Solyc10g081990.1.1 | EnsemblPlantsGene:Solyc10g081990.1 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45284 | PFAM:PF00076 | PFscan:PS50102 | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002769C0E |
| UniProt:K4D385 | MapMan:16.8.1.2.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:62904102..62904410
Molecular Weight (calculated)
11743.2 Da
IEP (calculated)
9.482
GRAVY (calculated)
-0.233
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNSSVYVGN LHEGVNNRVL YDILIQAGYV IDLYIPYDME TNKHKGFAFV KYETKEIADY AVKLFSDIVI LYEKTLKFAI SRPMTTPNIP SRPSSNRRVY
101: GK
101: GK
001: MSGTSNCTVY IGNVDERVSD RVLYDIMIQA GRVIDLHIPR DKETDKPKGF AFAEYETEEI ADYAVKLFSG LVSLYNRTLK FAISGQDKLQ SNSANSGHRA
101: RPQSLAFEHS DRAAYHHLER FSSQLISPPS PLPLDYTQEP PPPGVSNGAS LEYSRRVLGS ALDSINHSRP RRY
101: RPQSLAFEHS DRAAYHHLER FSSQLISPPS PLPLDYTQEP PPPGVSNGAS LEYSRRVLGS ALDSINHSRP RRY
Arabidopsis Description
At4g10100 [Source:UniProtKB/TrEMBL;Acc:Q8GW25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.