Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001109 | Potato | mitochondrion | 85.06 | 79.75 |
| Solyc06g074760.1.1 | Tomato | nucleus | 36.79 | 38.9 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 38.64 | 38.55 |
| CDY04520 | Canola | cytosol, plastid | 31.36 | 37.46 |
| KRH25125 | Soybean | nucleus | 36.3 | 34.43 |
| KRH30548 | Soybean | nucleus | 35.68 | 33.6 |
| Solyc11g007910.1.1 | Tomato | nucleus | 34.44 | 33.29 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 30.99 | 32.85 |
| KRH22786 | Soybean | nucleus | 33.58 | 32.04 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 16.91 | 31.86 |
| KRH26545 | Soybean | nucleus | 31.23 | 31.78 |
| AT2G27950.2 | Thale cress | nucleus | 32.35 | 31.23 |
| Solyc03g071670.1.1 | Tomato | nucleus | 15.19 | 27.52 |
| Solyc10g005220.2.1 | Tomato | nucleus, plastid | 7.28 | 6.26 |
| Solyc02g082100.2.1 | Tomato | vacuole | 7.53 | 5.66 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009966 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K4D9Q7 | PFAM:PF13920 |
| PFscan:PS50089 | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | EnsemblPlantsGene:Solyc11g066500.1 | EnsemblPlants:Solyc11g066500.1.1 | UniParc:UPI0002769FA5 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr11:+:52258437..52263957
Molecular Weight (calculated)
92230.0 Da
IEP (calculated)
4.338
GRAVY (calculated)
-0.970
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAGLHNIS TFGSSLFIES QSSVSRQRGE HDRPKTRASS IRQMWRELES EHVVSNSYAP TGDRQRPQGN DGVNEDQNQS HIELDNYFDD GRSVSSDLSS
101: DLGEVERERV RQIIQEWMHT GVKSHSQSLN VSHVNNCSKA QCERTSIHQS GTSSPRDEVA VEIGSQFEQG RDGLSVDHSR HGERKALRKL CGRQALVDLL
201: MRSQREREKE LQGLLECKPV SDFAYRNRIQ SLLRGRFLRN DSLTNDERTA SNAASELGLL RRRHTVSDLR EEILSRLDDN VRGSTTNTQP SSPKDEPHPS
301: QSNSEQEVID ECYDQAELIN EEREINGSHA VTNSENTICE LVNHQCNIDQ IAETSEQVGE DEDHDQATSN LVLFGSLPVR HNNENIDLVE NDGNQWLQEE
401: HATFHDNDAT QSEASDFNDV LNGHFRDLDR NIFEDYDWEG SSAQAEELQE YILEPEGSDL EQAEELEEFV TEHEESESQH LYADQNEWID DATENMGGDS
501: QEGTPNQSYP ESLDGGIEEQ NHTQEPHDDE WHEEANDDWS DTPSGQVDGS IGRVDSFYIP DDDNVYSIEL RELLSRRRVS NLLRSSFRES LNQLIQSYVE
601: RQGNASFDWD MDGTSSYPSD AEQEQQQENV NQEGPQMNME GNPFSMTPPP EAPPQPHWNR VSEHQNFRRQ NPHQHMGESE WDIINELKID MAVLHQRMND
701: MQRMLQTCME MQVELQRSVR QEVSAALNRS AGSTDVNICG DGLLNDESKW DKVRKGICCL CCKNNIDSLL YRCGHMCTCS KCAEQLMHEK AKCPMCLAPV
801: VEVIRAFSSQ
101: DLGEVERERV RQIIQEWMHT GVKSHSQSLN VSHVNNCSKA QCERTSIHQS GTSSPRDEVA VEIGSQFEQG RDGLSVDHSR HGERKALRKL CGRQALVDLL
201: MRSQREREKE LQGLLECKPV SDFAYRNRIQ SLLRGRFLRN DSLTNDERTA SNAASELGLL RRRHTVSDLR EEILSRLDDN VRGSTTNTQP SSPKDEPHPS
301: QSNSEQEVID ECYDQAELIN EEREINGSHA VTNSENTICE LVNHQCNIDQ IAETSEQVGE DEDHDQATSN LVLFGSLPVR HNNENIDLVE NDGNQWLQEE
401: HATFHDNDAT QSEASDFNDV LNGHFRDLDR NIFEDYDWEG SSAQAEELQE YILEPEGSDL EQAEELEEFV TEHEESESQH LYADQNEWID DATENMGGDS
501: QEGTPNQSYP ESLDGGIEEQ NHTQEPHDDE WHEEANDDWS DTPSGQVDGS IGRVDSFYIP DDDNVYSIEL RELLSRRRVS NLLRSSFRES LNQLIQSYVE
601: RQGNASFDWD MDGTSSYPSD AEQEQQQENV NQEGPQMNME GNPFSMTPPP EAPPQPHWNR VSEHQNFRRQ NPHQHMGESE WDIINELKID MAVLHQRMND
701: MQRMLQTCME MQVELQRSVR QEVSAALNRS AGSTDVNICG DGLLNDESKW DKVRKGICCL CCKNNIDSLL YRCGHMCTCS KCAEQLMHEK AKCPMCLAPV
801: VEVIRAFSSQ
001: MAIAGLQNIL VIDSSFRRDS EVQATRQREN EGRSSVRASS LLQMWRELED DHVMGHARER DGERRSVSSP SNTMRGNGCD SNISAHDIVR DSVNLGENEL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
Arabidopsis Description
Ring/U-Box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IHN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.