Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22786 | Soybean | nucleus | 66.58 | 62.43 |
| KRH66429 | Soybean | nucleus | 14.45 | 53.99 |
| KRH25125 | Soybean | nucleus | 57.04 | 53.16 |
| KRH30548 | Soybean | nucleus | 54.27 | 50.23 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 41.33 | 40.52 |
| CDY04520 | Canola | cytosol, plastid | 34.05 | 39.97 |
| AT2G27950.2 | Thale cress | nucleus | 36.93 | 35.04 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 33.42 | 34.82 |
| KRH34682 | Soybean | nucleus | 37.06 | 34.75 |
| KRG92104 | Soybean | nucleus | 36.93 | 34.67 |
| PGSC0003DMT400018447 | Potato | nucleus | 32.54 | 33.95 |
| Solyc06g074760.1.1 | Tomato | nucleus | 31.91 | 33.16 |
| Solyc11g066500.1.1 | Tomato | nucleus, plastid | 31.78 | 31.23 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 31.03 | 28.59 |
| KRH12155 | Soybean | nucleus | 8.42 | 7.31 |
| KRH37161 | Soybean | nucleus | 7.04 | 6.07 |
Protein Annotations
| EMBL:ACUP02007718 | EnsemblPlants:KRH26545 | EnsemblPlantsGene:GLYMA_12G179300 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 |
| PFscan:PS50089 | ProteinID:KRH26544.1 | ProteinID:KRH26545 | ProteinID:KRH26545.1 | ProteinID:KRH26546.1 | ProteinID:KRH26547.1 |
| SEG:seg | SUPFAM:SSF57850 | UniParc:UPI000294CCBB | UniProt:K7LVM6 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr12:+:33928417..33933941
Molecular Weight (calculated)
90522.7 Da
IEP (calculated)
4.458
GRAVY (calculated)
-0.911
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MWREIEDEQV VRQVQGRPGE VQRSDGLVVD LSQENVPNSS NQREEHMIED AVLGENDSET WSQSQNEFHD EQEELNNSSR ETSSDFGVVE RERVRQIFRE
101: WMNSGSRGHA SNNSQGNNSR GEWLGETEQE RVSATREWVQ MSSHQRGVSS GENREEQSSE NGTQIECVRD GFVVNQNEGQ CQTEHTRRGI RKLWGRQVFL
201: DMLKKAEMER QREVQELLDH RVVSHFPHRN RIQALLRGRF LRNDRSIDNN RSTSIAESEL GLLRQKQTVS GLREGFVFRK DNFGCSHATS NTSDTSSEND
301: IDVNTIEDTG ASSSQAVPTV HSQQSEPNNR VSDGLEISGD QICSKGTICE NLDWQGSTAH VEARDLESSF STRVERGDGT GGNVDMMPTE NPSNDCSQLS
401: LQIEDTEHDN MHEFSEVHTE QSQRGDINND ESNFSNHDDR VYSNIVDDVD LIESIALEGE QQEEVIIEND GSDWHQSVDD IQLSSTTNEW PQNILGSEDG
501: ENSRMQEQEV PEVWQEDGGF QEAVEIWLGG PSDNEVAPVG RIHGFYFPED DNVYSVELRE LLSRRSVSNL LRSSFRESLD QLIQSYVERQ GHAHVEWELQ
601: ETTPSSPLAE QVSGQRSRGP IVGPQATVNS SLNRPLPPTP PPQPLWDRHS RHDNWSQSDI NNQRLGIEWD IVNDLRIDMV RLQQRMNNMQ RMLEACMDMQ
701: LELQRSIRQE VSAALNRSTG SSGIQNRVSP DDKSKWECVR KGLCCICCES NINSLLYRCG HMCTCSKCAN DLLQSRRKCP MCQAPVVEVI RAYSIQ
101: WMNSGSRGHA SNNSQGNNSR GEWLGETEQE RVSATREWVQ MSSHQRGVSS GENREEQSSE NGTQIECVRD GFVVNQNEGQ CQTEHTRRGI RKLWGRQVFL
201: DMLKKAEMER QREVQELLDH RVVSHFPHRN RIQALLRGRF LRNDRSIDNN RSTSIAESEL GLLRQKQTVS GLREGFVFRK DNFGCSHATS NTSDTSSEND
301: IDVNTIEDTG ASSSQAVPTV HSQQSEPNNR VSDGLEISGD QICSKGTICE NLDWQGSTAH VEARDLESSF STRVERGDGT GGNVDMMPTE NPSNDCSQLS
401: LQIEDTEHDN MHEFSEVHTE QSQRGDINND ESNFSNHDDR VYSNIVDDVD LIESIALEGE QQEEVIIEND GSDWHQSVDD IQLSSTTNEW PQNILGSEDG
501: ENSRMQEQEV PEVWQEDGGF QEAVEIWLGG PSDNEVAPVG RIHGFYFPED DNVYSVELRE LLSRRSVSNL LRSSFRESLD QLIQSYVERQ GHAHVEWELQ
601: ETTPSSPLAE QVSGQRSRGP IVGPQATVNS SLNRPLPPTP PPQPLWDRHS RHDNWSQSDI NNQRLGIEWD IVNDLRIDMV RLQQRMNNMQ RMLEACMDMQ
701: LELQRSIRQE VSAALNRSTG SSGIQNRVSP DDKSKWECVR KGLCCICCES NINSLLYRCG HMCTCSKCAN DLLQSRRKCP MCQAPVVEVI RAYSIQ
001: MAIAGLQNIL VIDSSFRRDS EVQATRQREN EGRSSVRASS LLQMWRELED DHVMGHARER DGERRSVSSP SNTMRGNGCD SNISAHDIVR DSVNLGENEL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
Arabidopsis Description
Ring/U-Box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IHN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.