Factsheet for TraesCS5A01G285400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G292800.2	Wheat	cytosol	98.23	98.23
TraesCS5B01G284600.1	Wheat	cytosol	98.23	96.52
EER99152	Sorghum	cytosol	91.15	91.56
Os09t0505700-02	Rice	cytosol, plastid	90.27	89.47
VIT_14s0171g00130.t01	Wine grape	cytosol	82.3	83.78
Zm00001d021050_P002	Maize	extracellular	90.27	82.59
Solyc05g007260.2.1	Tomato	cytosol, extracellular	78.76	82.41
KRH06978	Soybean	nucleus	81.42	80.7
PGSC0003DMT400059351	Potato	plastid	55.75	80.25
KRG94486	Soybean	nucleus	80.09	79.39
AT1G63290.1	Thale cress	cytosol	78.76	78.41
AT3G01850.2	Thale cress	cytosol	77.88	78.22
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	94.25	74.48
Bra027631.1-P	Field mustard	cytosol	81.42	65.48
CDY47340	Canola	plastid	81.42	58.97
CDY49188	Canola	plastid	80.97	57.91
GSMUA_Achr11P...	Banana	cytosol	80.97	57.01
TraesCS4A01G019100.1	Wheat	plastid	40.27	33.33

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	InterPro:Aldolase_TIM
GO:GO:0003674	GO:GO:0003824	GO:GO:0004750	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016857	InterPro:IPR013785	PFAM:PF00834
PIRSF:PIRSF001461	ScanProsite:PS01085	ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	InterPro:Ribul_P_3_epim
InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	TIGRFAMs:TIGR01163	EnsemblPlantsGene:TraesCS5A01G285400	EnsemblPlants:TraesCS5A01G285400.1
TIGR:cd00429	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:493470864..493474574

Molecular Weight (calculated)

24077.1 Da

IEP (calculated)

5.330

GRAVY (calculated)

0.019

Length

226 amino acids

Sequence
(BLAST)

001: MAAAAKIAPS MLSSDFANLA SEAERMVRLG ADWLHMDVMD GHFVPNLTIG APVIESLRKH TKAYLDCHLM VTNPSDYVEA FGKAGASGFT FHIEVARDNW
101: KELTQSIKAK GMRPGVSLKP GTPVEDVFPL VEAETPVELV LVMTVEPGFG GQKFMPEMMD KVRTLRKKYP SLDIEVDGGL GPSTIDAAAS AGANCIVAGS
201: SVFGAPDPGE VISALRKSVE ASQIKS

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.