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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G63290.1 Thale cress cytosol 92.44 91.63
VIT_14s0171g00130.t01 Wine grape cytosol 82.22 83.33
KRG94486 Soybean nucleus 80.89 79.82
KRH06978 Soybean nucleus 80.44 79.39
TraesCS5A01G285400.1 Wheat cytosol 78.22 77.88
EER99152 Sorghum cytosol 77.78 77.78
TraesCS5D01G292800.2 Wheat cytosol 77.78 77.43
Os09t0505700-02 Rice cytosol, plastid 77.78 76.75
TraesCS5B01G284600.1 Wheat cytosol 77.33 75.65
Solyc05g007260.2.1 Tomato cytosol, extracellular 72.44 75.46
PGSC0003DMT400059351 Potato plastid 52.44 75.16
Bra027631.1-P Field mustard cytosol 91.11 72.95
Zm00001d021050_P002 Maize extracellular 76.89 70.04
CDY47340 Canola plastid 90.67 65.38
CDY49188 Canola plastid 89.78 63.92
HORVU5Hr1G076140.7 Barley mitochondrion, plastid 75.56 59.44
GSMUA_Achr11P... Banana cytosol 77.78 54.52
AT5G61410.1 Thale cress plastid 37.78 30.25
Protein Annotations
KEGG:00030+5.1.3.1KEGG:00040+5.1.3.1KEGG:00710+5.1.3.1Gene3D:3.20.20.70MapMan:3.9.2.2EntrezGene:821068
ProteinID:AEE73724.1ProteinID:AEE73725.1EMBL:AF370479ArrayExpress:AT3G01850EnsemblPlantsGene:AT3G01850RefSeq:AT3G01850
TAIR:AT3G01850RefSeq:AT3G01850-TAIR-GEnsemblPlants:AT3G01850.2TAIR:AT3G01850.2EMBL:AY086329InterPro:Aldolase_TIM
EMBL:BT002174GO:GO:0003674GO:GO:0003824GO:GO:0004750GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006098
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009052GO:GO:0009056GO:GO:0009987
GO:GO:0016853GO:GO:0016857GO:GO:0019323GO:GO:0044262GO:GO:0046872InterPro:IPR013785
RefSeq:NP_566153.1RefSeq:NP_850495.1PFAM:PF00834PIRSF:PIRSF001461PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS01085ScanProsite:PS01086
PANTHER:PTHR11749PANTHER:PTHR11749:SF3UniProt:Q94K13InterPro:Ribul_P_3_epimInterPro:Ribul_P_3_epim-likeInterPro:RibuloseP-bd_barrel
SUPFAM:SSF51366TIGRFAMs:TIGR01163UniParc:UPI00000AC03CSEG:seg::
Description
Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
Coordinates
chr3:-:299784..302397
Molecular Weight (calculated)
24043.2 Da
IEP (calculated)
4.991
GRAVY (calculated)
0.048
Length
225 amino acids
Sequence
(BLAST)
001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.