Factsheet for Bra027631.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G01850.2	Thale cress	cytosol	72.95	91.11
AT1G63290.1	Thale cress	cytosol	72.95	90.31
VIT_14s0171g00130.t01	Wine grape	cytosol	67.62	85.59
KRG94486	Soybean	nucleus	66.19	81.58
KRH06978	Soybean	nucleus	66.19	81.58
TraesCS5A01G285400.1	Wheat	cytosol	65.48	81.42
TraesCS5D01G292800.2	Wheat	cytosol	65.12	80.97
CDY49188	Canola	plastid	90.04	80.06
EER99152	Sorghum	cytosol	64.06	80.0
PGSC0003DMT400059351	Potato	plastid	44.48	79.62
Solyc05g007260.2.1	Tomato	cytosol, extracellular	60.85	79.17
Os09t0505700-02	Rice	cytosol, plastid	64.06	78.95
TraesCS5B01G284600.1	Wheat	cytosol	64.41	78.7
Zm00001d021050_P002	Maize	extracellular	63.35	72.06
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	64.41	63.29
GSMUA_Achr11P...	Banana	cytosol	64.06	56.07
Bra012963.1-P	Field mustard	plastid	34.16	34.04
Bra009244.1-P	Field mustard	plastid	33.1	33.82
Bra029310.1-P	Field mustard	cytosol	8.19	29.87
Bra012962.1-P	Field mustard	plastid	19.93	24.24

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	InterPro:Aldolase_TIM
EnsemblPlantsGene:Bra027631	EnsemblPlants:Bra027631.1	EnsemblPlants:Bra027631.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016857	InterPro:IPR013785	UniProt:M4EFR8	PFAM:PF00834
ScanProsite:PS01085	ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel
SUPFAM:SSF51366	TIGRFAMs:TIGR01163	UniParc:UPI0002542482	:	:	:

Description

AT3G01850 (E=2e-117) | ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative

Coordinates

chrA09:+:7271521..7274078

Molecular Weight (calculated)

30379.8 Da

IEP (calculated)

4.905

GRAVY (calculated)

-0.013

Length

281 amino acids

Sequence
(BLAST)

001: MFPLNLFAGS SPGEEEETKP DSPLSLSLCK IETLSESHFF FFLFNPQSVV RNSRKMVVSP KIAPSMLSSD FANLAAEAKR MVDLGADWLH MDIMDGHFVP
101: NLTIGAPVIE SLRKHTSAYL DCHLMVTNPM DYVEQMGKAG ASGFTFHVEV AKENWQELVS KIKSAGMRPG VALKPGTPVE EVYPLVEGET PVEMVLVMTV
201: EPGFGGQKFM PSMMDKVRAL RQKYPTLDIE VDGGLGPSTI EAAAEAGANC IVAGSSVFGA PEPGKVISLL RTSVEKAQPT T

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.