Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G01850.2 | Thale cress | cytosol | 91.63 | 92.44 |
| VIT_14s0171g00130.t01 | Wine grape | cytosol | 81.94 | 83.78 |
| KRG94486 | Soybean | nucleus | 80.18 | 79.82 |
| KRH06978 | Soybean | nucleus | 79.3 | 78.95 |
| TraesCS5A01G285400.1 | Wheat | cytosol | 78.41 | 78.76 |
| TraesCS5D01G292800.2 | Wheat | cytosol | 77.97 | 78.32 |
| Os09t0505700-02 | Rice | cytosol, plastid | 77.97 | 77.63 |
| EER99152 | Sorghum | cytosol | 76.65 | 77.33 |
| TraesCS5B01G284600.1 | Wheat | cytosol | 77.53 | 76.52 |
| PGSC0003DMT400059351 | Potato | plastid | 52.86 | 76.43 |
| Solyc05g007260.2.1 | Tomato | cytosol, extracellular | 72.25 | 75.93 |
| Bra027631.1-P | Field mustard | cytosol | 90.31 | 72.95 |
| Zm00001d021050_P002 | Maize | extracellular | 75.77 | 69.64 |
| CDY47340 | Canola | plastid | 89.43 | 65.06 |
| CDY49188 | Canola | plastid | 88.55 | 63.61 |
| HORVU5Hr1G076140.7 | Barley | mitochondrion, plastid | 75.33 | 59.79 |
| GSMUA_Achr11P... | Banana | cytosol | 77.53 | 54.83 |
| AT5G61410.1 | Thale cress | plastid | 38.33 | 30.96 |
Protein Annotations
| KEGG:00030+5.1.3.1 | KEGG:00040+5.1.3.1 | KEGG:00710+5.1.3.1 | Gene3D:3.20.20.70 | MapMan:3.9.2.2 | EntrezGene:842635 |
| UniProt:A0A178WDG0 | ProteinID:AAG52146.1 | ProteinID:AEE34082.1 | ArrayExpress:AT1G63290 | EnsemblPlantsGene:AT1G63290 | RefSeq:AT1G63290 |
| TAIR:AT1G63290 | RefSeq:AT1G63290-TAIR-G | EnsemblPlants:AT1G63290.1 | TAIR:AT1G63290.1 | EMBL:AY087710 | EMBL:AY102098 |
| EMBL:AY143824 | InterPro:Aldolase_TIM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004750 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0006098 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009052 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016853 | GO:GO:0016857 | GO:GO:0019323 |
| GO:GO:0044262 | GO:GO:0046872 | InterPro:IPR013785 | RefSeq:NP_176518.1 | ProteinID:OAP16418.1 | PFAM:PF00834 |
| PIRSF:PIRSF001461 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS01085 | ScanProsite:PS01086 | PANTHER:PTHR11749 | PANTHER:PTHR11749:SF3 | UniProt:Q9C8T3 |
| InterPro:Ribul_P_3_epim | InterPro:Ribul_P_3_epim-like | InterPro:RibuloseP-bd_barrel | SUPFAM:SSF51366 | TIGRFAMs:TIGR01163 | UniParc:UPI00000AC55C |
| SEG:seg | : | : | : | : | : |
Description
Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q9C8T3]
Coordinates
chr1:-:23471844..23473922
Molecular Weight (calculated)
24112.4 Da
IEP (calculated)
6.009
GRAVY (calculated)
0.082
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVSPKIAP SMLSSDFANL AAEAKRMIDL GANWLHMDIM DGHFVSNLTI GAPVIESLRK HTNAYLDCHL MVTNPMDYVD QMAKAGASGF TFHVEVAQEN
101: WQELVKKIKA AGMRPGVALK PGTPVEQVYP LVEGTNPVEM VLVMTVEPGF GGQKFMPSMM DKVRALRNKY PTLDIEVDGG LGPSTIDAAA AAGANCIVAG
201: SSVFGAPKPG DVISLLRASV EKAQPST
101: WQELVKKIKA AGMRPGVALK PGTPVEQVYP LVEGTNPVEM VLVMTVEPGF GGQKFMPSMM DKVRALRNKY PTLDIEVDGG LGPSTIDAAA AAGANCIVAG
201: SSVFGAPKPG DVISLLRASV EKAQPST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.