CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027631.1-P	Field mustard	cytosol	80.06	90.04
AT3G01850.2	Thale cress	cytosol	63.92	89.78
AT1G63290.1	Thale cress	cytosol	63.61	88.55
CDY47340	Canola	plastid	86.71	87.82
VIT_14s0171g00130.t01	Wine grape	cytosol	59.81	85.14
KRG94486	Soybean	nucleus	58.54	81.14
KRH06978	Soybean	nucleus	58.54	81.14
TraesCS5A01G285400.1	Wheat	cytosol	57.91	80.97
TraesCS5D01G292800.2	Wheat	cytosol	57.59	80.53
EER99152	Sorghum	cytosol	56.65	79.56
Solyc05g007260.2.1	Tomato	cytosol, extracellular	53.8	78.7
Os09t0505700-02	Rice	cytosol, plastid	56.65	78.51
PGSC0003DMT400059351	Potato	plastid	38.92	78.34
TraesCS5B01G284600.1	Wheat	cytosol	56.96	78.26
Zm00001d021050_P002	Maize	extracellular	56.01	71.66
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	55.7	61.54
GSMUA_Achr11P...	Banana	cytosol	56.65	55.76
CDY02150	Canola	plastid	30.7	34.4
CDX70050	Canola	plastid	29.43	33.82
CDY64139	Canola	plastid	30.06	33.57
CDX98974	Canola	plastid	29.11	33.45
CDY71665	Canola	plastid	19.3	25.52

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	GO:A0A078IJE1
UniProt:A0A078IJE1	InterPro:Aldolase_TIM	EnsemblPlants:CDY49188	ProteinID:CDY49188	ProteinID:CDY49188.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857	EnsemblPlantsGene:GSBRNA2T00092548001
InterPro:IPR013785	PFAM:PF00834	ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	MetaCyc:PWY-1861
MetaCyc:PWY-5723	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	UniParc:UPI0004EF392E	:

Description

BnaA09g10900DBnaA09g10900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJE1]

Coordinates

chrLK032817:+:552..2709

Molecular Weight (calculated)

34866.6 Da

IEP (calculated)

7.236

GRAVY (calculated)

0.048

Length

316 amino acids

Sequence
(BLAST)

001: MFGRSSCHWS SNRSVFTFQE KKKKQNQIRL SLSLCKIETL SESHFFFFLF NPQSVVRNSR KMVVSPKIAP SMLSSDFANL AAEAKRMVDL GADWLHMDIM
101: LLIFVVMDLY DTEPFLVSYL LTSLLFHLQD GHFVPNLTIG APVIESLRKH TSAYLDCHLM VTNPMDYVEQ MGKAGASGFT FHVEVAKENW QELVRKVKSA
201: GMRPGVALKP GTPVEEVYPL VEGATPVEMV LVMTVEPGFG GQKFMPNMMD KVRALRQKYP TLDIEVDGGL GPSTIEAAAE AGANCIVAGS SVFGAPEPGK
301: VISLLRTSVE KAQPTA

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.