CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G01850.2	Thale cress	cytosol	65.38	90.67
AT1G63290.1	Thale cress	cytosol	65.06	89.43
CDY49188	Canola	plastid	87.82	86.71
VIT_14s0171g00130.t01	Wine grape	cytosol	60.9	85.59
KRG94486	Soybean	nucleus	59.62	81.58
KRH06978	Soybean	nucleus	59.62	81.58
TraesCS5A01G285400.1	Wheat	cytosol	58.97	81.42
TraesCS5D01G292800.2	Wheat	cytosol	58.65	80.97
EER99152	Sorghum	cytosol	57.69	80.0
Solyc05g007260.2.1	Tomato	cytosol, extracellular	54.81	79.17
PGSC0003DMT400059351	Potato	plastid	39.74	78.98
Os09t0505700-02	Rice	cytosol, plastid	57.69	78.95
TraesCS5B01G284600.1	Wheat	cytosol	58.01	78.7
Zm00001d021050_P002	Maize	extracellular	57.05	72.06
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	57.37	62.59
GSMUA_Achr11P...	Banana	cytosol	57.69	56.07
CDX70050	Canola	plastid	29.17	33.09
CDY02150	Canola	plastid	29.81	32.98
CDX98974	Canola	plastid	28.85	32.73
CDY64139	Canola	plastid	29.49	32.51
CDY71665	Canola	plastid	19.87	25.94

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	GO:A0A078I8T7
UniProt:A0A078I8T7	InterPro:Aldolase_TIM	EnsemblPlants:CDY47340	ProteinID:CDY47340	ProteinID:CDY47340.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857	EnsemblPlantsGene:GSBRNA2T00087199001
InterPro:IPR013785	PFAM:PF00834	ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	MetaCyc:PWY-1861
MetaCyc:PWY-5723	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	UniParc:UPI0004EE2359	SEG:seg

Description

BnaCnng14770DBnaCnng14770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8T7]

Coordinates

chrLK032710:+:74780..82749

Molecular Weight (calculated)

34257.7 Da

IEP (calculated)

6.170

GRAVY (calculated)

0.019

Length

312 amino acids

Sequence
(BLAST)

001: MWPLVRFTWV FTFQEEKKKQ NPKPDSSLCK IETLSESHFF FLFNPQSVGR NSRKMVVSPK IAPSMLSSDF ANLAAEAKRM VDLGADWLHM DIMKLSFVVI
101: DLNDTEPFLV SYLLTSLLFH LQDGHFVPNL TIGAPVIESL RKHTSAYLDC HLMVTNPMDY VEQMGKAGAS GFTFHVEVAK ENWQELVSKI KSAGMRPGVA
201: LKPGTPVEEV YPLVEGETPV EMVLVMTVEP GFGGQKFMPN MMDKVRALRQ KYPTLDIEVD GGLGPSTIEA AAAAGANCIV AGSSVFGAPE SGKATLVISL
301: LRTSVEKAQP TT

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.