CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0505700-02	Rice	cytosol, plastid	93.78	92.54
TraesCS5A01G285400.1	Wheat	cytosol	91.56	91.15
TraesCS5D01G292800.2	Wheat	cytosol	91.11	90.71
Zm00001d021050_P002	Maize	extracellular	99.11	90.28
TraesCS5B01G284600.1	Wheat	cytosol	91.11	89.13
VIT_14s0171g00130.t01	Wine grape	cytosol	83.56	84.68
Solyc05g007260.2.1	Tomato	cytosol, extracellular	78.67	81.94
KRH06978	Soybean	nucleus	81.33	80.26
KRG94486	Soybean	nucleus	80.89	79.82
PGSC0003DMT400059351	Potato	plastid	55.56	79.62
AT3G01850.2	Thale cress	cytosol	77.78	77.78
AT1G63290.1	Thale cress	cytosol	77.33	76.65
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	89.78	70.63
Bra027631.1-P	Field mustard	cytosol	80.0	64.06
CDY47340	Canola	plastid	80.0	57.69
GSMUA_Achr11P...	Banana	cytosol	81.33	57.01
CDY49188	Canola	plastid	79.56	56.65
EER92786	Sorghum	extracellular, plastid	40.0	32.73

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	EntrezGene:8054783
InterPro:Aldolase_TIM	UniProt:C5X4P9	EnsemblPlants:EER99152	ProteinID:EER99152	ProteinID:EER99152.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004750	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009052	GO:GO:0009056	GO:GO:0009987	GO:GO:0016853	GO:GO:0016857
GO:GO:0019323	GO:GO:0044262	GO:GO:0046872	InterPro:IPR013785	PFAM:PF00834	PIRSF:PIRSF001461
ScanProsite:PS01085	ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	MetaCyc:PWY-1861	MetaCyc:PWY-5723
InterPro:Ribul_P_3_epim	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	EnsemblPlantsGene:SORBI_3002G257300	SUPFAM:SSF51366	unigene:Sbi.12041
TIGRFAMs:TIGR01163	UniParc:UPI0001A83C04	RefSeq:XP_002462631.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:64305514..64309168

Molecular Weight (calculated)

24114.2 Da

IEP (calculated)

5.638

GRAVY (calculated)

0.000

Length

225 amino acids

Sequence
(BLAST)

001: MAAAKIAPSM LSSDFANLAS EAERMVRLGA DWLHMDIMDG HFVPNLTIGA PVIQSLRKHT KAYLDCHLMV TNPSDYVEPF GKAGASGFTF HIEVARDNWQ
101: DLIQSIKSKG MRPGVSLRPG TPVEEVFPLV EAENPVELVL VMTVEPGFGG QKFMPEMMDK VRTLRKKYPS LDIEVDGGLG PSTIDVAASA GANCIVAGSS
201: IFGAADPGAV ISVLRKSVEG SQNKN

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.