Factsheet for GSMUA_Achr11P15350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0171g00130.t01	Wine grape	cytosol	59.19	85.59
KRH06978	Soybean	nucleus	58.88	82.89
EER99152	Sorghum	cytosol	57.01	81.33
KRG94486	Soybean	nucleus	57.63	81.14
TraesCS5A01G285400.1	Wheat	cytosol	57.01	80.97
Os09t0505700-02	Rice	cytosol, plastid	57.32	80.7
TraesCS5D01G292800.2	Wheat	cytosol	56.7	80.53
Solyc05g007260.2.1	Tomato	cytosol, extracellular	53.27	79.17
TraesCS5B01G284600.1	Wheat	cytosol	56.07	78.26
AT3G01850.2	Thale cress	cytosol	54.52	77.78
AT1G63290.1	Thale cress	cytosol	54.83	77.53
PGSC0003DMT400059351	Potato	plastid	37.69	77.07
Zm00001d021050_P002	Maize	extracellular	56.39	73.28
Bra027631.1-P	Field mustard	cytosol	56.07	64.06
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	55.45	62.24
CDY47340	Canola	plastid	56.07	57.69
CDY49188	Canola	plastid	55.76	56.65
GSMUA_Achr6P10790_001	Banana	plastid	27.41	31.21
GSMUA_Achr2P21940_001	Banana	plastid	27.1	30.74

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	Gene3D:3.20.20.70	MapMan:3.9.2.2	InterPro:Aldolase_TIM
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857
EnsemblPlantsGene:GSMUA_Achr11G15350_001	EnsemblPlants:GSMUA_Achr11P15350_001	EnsemblPlants:GSMUA_Achr11T15350_001	InterPro:IPR013785	UniProt:M0RSG5	PFAM:PF00834
ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF3	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366
UniParc:UPI000296DDC2	SEG:seg	:	:	:	:

Description

Ribulose-phosphate 3-epimerase, cytoplasmic isoform [Source:GMGC_GENE;Acc:GSMUA_Achr11G15350_001]

Coordinates

chr11:-:16908981..16915500

Molecular Weight (calculated)

35334.8 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.038

Length

321 amino acids

Sequence
(BLAST)

001: MAVVAKIAPS MLSSDFANLA SEAERMLRFG ADWLHMDIMV RVFYNWTPSY YAVHSIINSV RIFSIASSSN SSSFLRLICR SHGTFPLFGL QSSHLNICYY
101: HQDLHRRPLR PGSRPGFCSD RRALLSELAQ KLSGRTLSHL HFVPNLTIGA PVIESLRKHT KAYLDCHLMV TNPLDYVEPL AKAGASGFTF HVEVAKDYWQ
201: DLVHQIKVKG MRPGVALKPG TPVEEVEGEN PVEMVLVMTV EPGFGGQKFM PETMDKVRAL RKKYPSLDIE VDGGLGPSTI DMAASAGANC IVAGSSVFGA
301: KEPANVISIL RKSVRDAQQS S

Best Arabidopsis Sequence Match ( AT3G01850.1 )
(BLAST)

001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT

Arabidopsis Description

Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:Q94K13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.