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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98974 Canola plastid 87.9 89.82
Bra009244.1-P Field mustard plastid 87.54 89.45
CDX70050 Canola plastid 87.54 89.45
Bra012963.1-P Field mustard plastid 89.68 89.36
CDY02150 Canola plastid 89.68 89.36
CDY64139 Canola plastid 88.26 87.63
Bra029310.1-P Field mustard cytosol 23.84 87.01
KRH56893 Soybean plastid 84.34 84.64
KRH03501 Soybean plastid 83.27 83.57
TraesCS4B01G285000.1 Wheat plastid 81.14 83.52
TraesCS4A01G019100.1 Wheat plastid 81.14 83.52
TraesCS4D01G283800.1 Wheat golgi, plastid 81.14 83.52
Solyc03g115820.2.1 Tomato plastid 81.85 81.56
GSMUA_Achr6P10790_001 Banana plastid 81.49 81.21
Zm00001d027841_P002 Maize plastid 79.0 81.02
Os03t0169100-01 Rice plastid 78.29 80.29
PGSC0003DMT400050256 Potato plastid 80.43 79.3
EER92786 Sorghum extracellular, plastid 77.22 78.91
VIT_17s0000g06450.t01 Wine grape plastid 80.43 75.59
GSMUA_Achr2P21940_001 Banana plastid 75.8 75.27
CDY71665 Canola plastid 61.21 71.97
Zm00001d048324_P001 Maize plastid 75.44 68.17
Bra012962.1-P Field mustard plastid 50.89 61.9
HORVU4Hr1G074810.3 Barley cytosol, plastid 62.99 54.63
AT1G63290.1 Thale cress cytosol 30.96 38.33
AT3G01850.2 Thale cress cytosol 30.25 37.78
Protein Annotations
KEGG:00030+5.1.3.1KEGG:00040+5.1.3.1KEGG:00710+5.1.3.1MapMan:1.2.10Gene3D:3.20.20.70EntrezGene:836262
UniProt:A0A178UPG9ProteinID:AED97463.1ProteinID:AED97464.1EMBL:AF015274ArrayExpress:AT5G61410EnsemblPlantsGene:AT5G61410
RefSeq:AT5G61410TAIR:AT5G61410RefSeq:AT5G61410-TAIR-GEnsemblPlants:AT5G61410.1TAIR:AT5G61410.1EMBL:AY045855
EMBL:AY091381InterPro:Aldolase_TIMUnigene:At.25118ProteinID:BAB08496.1GO:GO:0003674GO:GO:0003824
GO:GO:0004750GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006098GO:GO:0006139GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009052GO:GO:0009056GO:GO:0009409GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009605GO:GO:0009607GO:GO:0009624
GO:GO:0009628GO:GO:0009941GO:GO:0009987GO:GO:0010319GO:GO:0016853GO:GO:0016857
GO:GO:0019323GO:GO:0044262GO:GO:0046872GO:GO:0048046InterPro:IPR013785RefSeq:NP_200949.1
RefSeq:NP_851240.1ProteinID:OAO94922.1PFAM:PF00834PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0006339PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS01085ScanProsite:PS01086
PANTHER:PTHR11749PANTHER:PTHR11749:SF4UniProt:Q9SAU2Symbol:RPEInterPro:Ribul_P_3_epim-likeInterPro:RibuloseP-bd_barrel
SUPFAM:SSF51366TIGRFAMs:TIGR01163UniParc:UPI0000031C9ESEG:seg::
Description
RPERPE [Source:UniProtKB/TrEMBL;Acc:A0A178UPG9]
Coordinates
chr5:-:24683606..24686217
Molecular Weight (calculated)
30010.4 Da
IEP (calculated)
8.221
GRAVY (calculated)
0.163
Length
281 amino acids
Sequence
(BLAST)
001: MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI
101: TIGPLVVDAL RPVTDLPLDV HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA IEYVLDMVDL VLIMSVNPGF
201: GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.