Factsheet for HORVU4Hr1G074810.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1
HORVU4Hr1G074810.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61410.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244
AT5G61410.1	HORVU4Hr1G074810.3	AT5G61410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G283800.1	Wheat	golgi, plastid	66.05	78.39
TraesCS4B01G285000.1	Wheat	plastid	65.43	77.66
TraesCS4A01G019100.1	Wheat	plastid	65.43	77.66
Bra029310.1-P	Field mustard	cytosol	16.36	68.83
Os03t0169100-01	Rice	plastid	57.1	67.52
Zm00001d027841_P002	Maize	plastid	56.79	67.15
CDX98974	Canola	plastid	54.01	63.64
AT5G61410.1	Thale cress	plastid	54.63	62.99
Bra009244.1-P	Field mustard	plastid	53.4	62.91
CDX70050	Canola	plastid	53.4	62.91
KRH56893	Soybean	plastid	54.32	62.86
KRH03501	Soybean	plastid	54.01	62.5
CDY02150	Canola	plastid	54.32	62.41
Bra012963.1-P	Field mustard	plastid	54.32	62.41
CDY64139	Canola	plastid	54.01	61.84
EER92786	Sorghum	extracellular, plastid	52.47	61.82
GSMUA_Achr2P21940_001	Banana	plastid	53.09	60.78
Solyc03g115820.2.1	Tomato	plastid	52.47	60.28
Bra012962.1-P	Field mustard	plastid	42.59	59.74
PGSC0003DMT400050256	Potato	plastid	51.85	58.95
Zm00001d048324_P001	Maize	plastid	56.48	58.84
GSMUA_Achr6P10790_001	Banana	plastid	50.93	58.51
VIT_17s0000g06450.t01	Wine grape	plastid	52.78	57.19
CDY71665	Canola	plastid	34.88	47.28
HORVU5Hr1G076140.7	Barley	mitochondrion, plastid	21.6	24.48

Protein Annotations

KEGG:00030+5.1.3.1	KEGG:00040+5.1.3.1	KEGG:00710+5.1.3.1	MapMan:1.2.10	Gene3D:3.20.20.70	UniProt:A0A287PP68
InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016857	EnsemblPlantsGene:HORVU4Hr1G074810	EnsemblPlants:HORVU4Hr1G074810.3	InterPro:IPR013785	PFAM:PF00834	ScanProsite:PS01085
ScanProsite:PS01086	PANTHER:PTHR11749	PANTHER:PTHR11749:SF4	InterPro:Ribul_P_3_epim-like	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366
TIGRFAMs:TIGR01163	UniParc:UPI000B487FB9	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:595768106..595772292

Molecular Weight (calculated)

35004.5 Da

IEP (calculated)

9.886

GRAVY (calculated)

-0.031

Length

324 amino acids

Sequence
(BLAST)

001: KQSPKPTERA PEKALRISVW LWGQRADNET GAVRLRLAPG DSPLLLPPTP PGRARVAPTH QIGPALPFHS IRQGLLVSPR RAAAAAAAAA REREREGEFG
101: GQMASPSSSL CSSLGYPRAA SLGGRRRVGF SSSRKLFQVR ASRVDKFSKS DIIVSPSILS ANFAKLGEQV KAVEVAGCDW IHVDVMDGRF VPNITIGPLI
201: VDALRPVTDL PLDVHLMIVE PEQRIPDFIK AGADIVSVHC EQTATIHLHR TVDQIKSLGA KAGVVLNPGT PLSAIEYVLE SVDLVLIMSV NPGFGGQSFI
301: ESQVKKIADL RKLCEEKVYI PYVL

Best Arabidopsis Sequence Match ( AT5G61410.1 )
(BLAST)

001: MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI
101: TIGPLVVDAL RPVTDLPLDV HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA IEYVLDMVDL VLIMSVNPGF
201: GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V

Arabidopsis Description

RPERPE [Source:UniProtKB/TrEMBL;Acc:A0A178UPG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.