Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029974_P001 | Maize | nucleus | 90.57 | 89.72 |
| EER94471 | Sorghum | nucleus | 87.11 | 86.02 |
| HORVU1Hr1G055420.1 | Barley | cytosol | 70.75 | 71.66 |
| TraesCS1B01G229500.1 | Wheat | nucleus | 69.18 | 69.4 |
| TraesCS1D01G218500.1 | Wheat | nucleus | 66.35 | 66.14 |
| TraesCS1A01G216300.1 | Wheat | nucleus | 65.72 | 65.52 |
| Os10t0564200-01 | Rice | nucleus | 67.61 | 63.99 |
| CDY42958 | Canola | nucleus | 30.19 | 30.97 |
| Zm00001d052798_P001 | Maize | nucleus | 25.16 | 27.4 |
| Zm00001d031266_P001 | Maize | nucleus | 25.79 | 25.71 |
| Solyc08g007170.1.1 | Tomato | nucleus | 29.56 | 23.04 |
| PGSC0003DMT400052836 | Potato | nucleus | 29.56 | 22.71 |
| VIT_00s0204g00020.t01 | Wine grape | nucleus | 27.67 | 22.39 |
| CDY35602 | Canola | cytosol | 28.62 | 21.98 |
| Bra040110.1-P | Field mustard | cytosol | 28.3 | 21.79 |
| Zm00001d021389_P001 | Maize | cytosol | 19.5 | 18.51 |
| Zm00001d006331_P001 | Maize | cytosol | 18.87 | 17.96 |
| AT4G17060.1 | Thale cress | nucleus | 15.41 | 15.81 |
Protein Annotations
| EnsemblPlants:Zm00001d000045_P001 | EnsemblPlants:Zm00001d000045_T001 | EnsemblPlantsGene:Zm00001d000045 | EntrezGene:100276948 | InterPro:IPR006578 | InterPro:MADF-dom |
| PANTHER:PTHR31307 | PANTHER:PTHR31307:SF3 | PFAM:PF13837 | SEG:seg | SMART:SM00595 | UniParc:UPI000220DF78 |
| UniProt:A0A1X7YE92 | MapMan:15.5.20 | : | : | : | : |
Description
Trihelix-transcription factor 28FRIGIDA interacting protein 2
Coordinates
chrB73V4_ctg182:+:953004..953960
Molecular Weight (calculated)
33601.7 Da
IEP (calculated)
9.552
GRAVY (calculated)
-0.458
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSCSDASR DDAVSSPDLP PLAAPVAAAA AAAAAAASSG GGIGLGGVGS GRRLPPPCWT HEETLALIEA YRDRWEALQK GNLRAADWDD VANAVTARCG
101: RFPTATPKSG VQCRHKVEKL RKRYRAERSR SAGRSKGPKW PFFPLLHDLA GGGVPDPSPN AIVKIKTKGP APPASSPSPV SSPSSEVEAV RSRSLHGLIS
201: NGGAGSGLRF TIPKASRTKP VAAAAVKSER SGSEDDAESE AMAEVAAALR AVGEGFLRME ERRLELSLQM EKERMESEMK RTQTMLDAQQ LFLEAFLGKQ
301: LQHKKAHVSP SSAAMEED
101: RFPTATPKSG VQCRHKVEKL RKRYRAERSR SAGRSKGPKW PFFPLLHDLA GGGVPDPSPN AIVKIKTKGP APPASSPSPV SSPSSEVEAV RSRSLHGLIS
201: NGGAGSGLRF TIPKASRTKP VAAAAVKSER SGSEDDAESE AMAEVAAALR AVGEGFLRME ERRLELSLQM EKERMESEMK RTQTMLDAQQ LFLEAFLGKQ
301: LQHKKAHVSP SSAAMEED
001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.