Factsheet for Zm00001d006331_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021389_P001	Maize	cytosol	78.74	78.51
KXG36174	Sorghum	cytosol	78.44	77.74
Os09t0558200-01	Rice	cytosol	65.27	64.88
TraesCS5B01G362600.2	Wheat	nucleus	55.09	52.72
TraesCS5D01G369500.2	Wheat	nucleus	53.89	51.43
TraesCS5A01G360100.1	Wheat	nucleus	52.99	50.43
HORVU5Hr1G088750.1	Barley	cytosol	20.96	44.87
HORVU5Hr1G088770.7	Barley	nucleus	48.5	44.38
CDX83751	Canola	nucleus	15.57	39.39
GSMUA_Achr4P05890_001	Banana	nucleus	35.33	38.56
CDY71514	Canola	nucleus	30.84	34.22
CDX73485	Canola	nucleus	31.44	34.2
GSMUA_Achr9P22780_001	Banana	mitochondrion	35.03	34.01
Bra007069.1-P	Field mustard	nucleus	31.44	33.76
AT3G54390.2	Thale cress	nucleus	30.24	32.37
VIT_13s0084g00800.t01	Wine grape	nucleus	30.54	31.97
KRH20709	Soybean	nucleus	30.54	31.29
KRH13365	Soybean	nucleus	30.84	30.84
Solyc01g096470.2.1	Tomato	nucleus	31.44	30.61
PGSC0003DMT400013829	Potato	nucleus	31.14	30.23
KRH30077	Soybean	nucleus	29.94	29.33
KRH62829	Soybean	nucleus	30.84	28.3
Zm00001d052798_P001	Maize	nucleus	16.77	19.18
Zm00001d000045_P001	Maize	nucleus	17.96	18.87
Zm00001d029974_P001	Maize	nucleus	17.96	18.69
Zm00001d031266_P001	Maize	nucleus	17.37	18.18

Protein Annotations

EnsemblPlants:Zm00001d006331_P001	EnsemblPlants:Zm00001d006331_T001	EnsemblPlantsGene:Zm00001d006331	EntrezGene:103647652	PANTHER:PTHR31307	PANTHER:PTHR31307:SF7
PFAM:PF13837	ProteinID:ONM23535.1	SEG:seg	UniParc:UPI0004DEADC1	UniProt:A0A1D6EVC8	MapMan:15.5.20

Description

sequence-specific DNA binding transcription factors

Coordinates

chr2:+:204901088..204902529

Molecular Weight (calculated)

36409.9 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.714

Length

334 amino acids

Sequence
(BLAST)

001: MDGLPDADAA PLAAAPPQKR DEWSESGIAR LLEAYEAKWL LRNRAKLKWS DWVDIAREVS VHCADDAAAA GKPPGGVGSS AKTPNQCKNK VESMKKRYRA
101: ETAAVARAGP AAAGPSWRFF ARMDGLLKGP PVGPDQVQQQ QALTNSRIDL RAPAKPEAEA EADFAAQLRD AVPGAFTDLM NMDANGAVPD KAEKADNSMQ
201: KESGPADSDA NVSSPRSKVA NEDVEEVEDK VWDRPKKRKS TDFDIAKSIE LLASSFLKVE QARMEMYRET ERMRVEAEIK KGEMELKRTE IMAKTHLQIA
301: RLFARKLKQS SGKNGGSSSV TAEVDTLTKK GENG

Best Arabidopsis Sequence Match ( AT3G54390.1 )
(BLAST)

001: MENGESNQEN LKSLNHDESL KKPSASSVVV DRLKRDEWSE GAVSTLLEAY ESKWVLRNRA KLKGQDWEDV AKHVSSRATH TKSPKTQTQC KNKIESMKKR
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.