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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G088770.7 Barley nucleus 52.56 22.47
KXG36174 Sorghum cytosol 48.08 22.26
Os09t0558200-01 Rice cytosol 47.44 22.02
Zm00001d021389_P001 Maize cytosol 46.79 21.79
Zm00001d006331_P001 Maize cytosol 44.87 20.96
GSMUA_Achr4P05890_001 Banana nucleus 35.26 17.97
CDX73485 Canola nucleus 31.41 15.96
CDY71514 Canola nucleus 30.77 15.95
Bra007069.1-P Field mustard nucleus 31.41 15.76
GSMUA_Achr9P22780_001 Banana mitochondrion 34.62 15.7
AT3G54390.2 Thale cress nucleus 30.77 15.38
VIT_13s0084g00800.t01 Wine grape nucleus 28.85 14.11
KRH20709 Soybean nucleus 28.85 13.8
KRH13365 Soybean nucleus 29.49 13.77
Solyc01g096470.2.1 Tomato nucleus 30.13 13.7
PGSC0003DMT400013829 Potato nucleus 30.13 13.66
KRH30077 Soybean nucleus 29.49 13.49
KRH62829 Soybean nucleus 29.49 12.64
HORVU1Hr1G055420.1 Barley cytosol 19.23 9.55
CDX83751 Canola nucleus 7.69 9.09
Protein Annotations
EnsemblPlants:HORVU5Hr1G088750.1EnsemblPlantsGene:HORVU5Hr1G088750PANTHER:PTHR31307PANTHER:PTHR31307:SF7UniParc:UPI000B485C0DUniProt:A0A287S6Q7
MapMan:15.5.20:::::
Description
No Description!
Coordinates
chrchr5H:-:582405739..582406551
Molecular Weight (calculated)
16624.4 Da
IEP (calculated)
7.371
GRAVY (calculated)
-0.915
Length
156 amino acids
Sequence
(BLAST)
001: XXXXADANGS ATVKAVDQAT HKDKESSRAA DSDAANVSSP RSKEIEANDD GAEEVDGTPR KRKGPELDVA RSIELLASSF VKIERARLEV YRDTERMRAE
101: AEVKKGEMEL RRTEIMAKTQ LQIARLFAKR LKECVGSRNG GSSSEMDTPT KKGENG
Best Arabidopsis Sequence Match ( AT3G54390.1 )
(BLAST)
001: MENGESNQEN LKSLNHDESL KKPSASSVVV DRLKRDEWSE GAVSTLLEAY ESKWVLRNRA KLKGQDWEDV AKHVSSRATH TKSPKTQTQC KNKIESMKKR
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.