Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||
---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU5Hr1G088770.7 | Barley | nucleus | 52.56 | 22.47 |
KXG36174 | Sorghum | cytosol | 48.08 | 22.26 |
Os09t0558200-01 | Rice | cytosol | 47.44 | 22.02 |
Zm00001d021389_P001 | Maize | cytosol | 46.79 | 21.79 |
Zm00001d006331_P001 | Maize | cytosol | 44.87 | 20.96 |
GSMUA_Achr4P05890_001 | Banana | nucleus | 35.26 | 17.97 |
CDX73485 | Canola | nucleus | 31.41 | 15.96 |
CDY71514 | Canola | nucleus | 30.77 | 15.95 |
Bra007069.1-P | Field mustard | nucleus | 31.41 | 15.76 |
GSMUA_Achr9P22780_001 | Banana | mitochondrion | 34.62 | 15.7 |
AT3G54390.2 | Thale cress | nucleus | 30.77 | 15.38 |
VIT_13s0084g00800.t01 | Wine grape | nucleus | 28.85 | 14.11 |
KRH20709 | Soybean | nucleus | 28.85 | 13.8 |
KRH13365 | Soybean | nucleus | 29.49 | 13.77 |
Solyc01g096470.2.1 | Tomato | nucleus | 30.13 | 13.7 |
PGSC0003DMT400013829 | Potato | nucleus | 30.13 | 13.66 |
KRH30077 | Soybean | nucleus | 29.49 | 13.49 |
KRH62829 | Soybean | nucleus | 29.49 | 12.64 |
HORVU1Hr1G055420.1 | Barley | cytosol | 19.23 | 9.55 |
CDX83751 | Canola | nucleus | 7.69 | 9.09 |
Protein Annotations
EnsemblPlants:HORVU5Hr1G088750.1 | EnsemblPlantsGene:HORVU5Hr1G088750 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF7 | UniParc:UPI000B485C0D | UniProt:A0A287S6Q7 |
MapMan:15.5.20 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:582405739..582406551
Molecular Weight (calculated)
16624.4 Da
IEP (calculated)
7.371
GRAVY (calculated)
-0.915
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXADANGS ATVKAVDQAT HKDKESSRAA DSDAANVSSP RSKEIEANDD GAEEVDGTPR KRKGPELDVA RSIELLASSF VKIERARLEV YRDTERMRAE
101: AEVKKGEMEL RRTEIMAKTQ LQIARLFAKR LKECVGSRNG GSSSEMDTPT KKGENG
101: AEVKKGEMEL RRTEIMAKTQ LQIARLFAKR LKECVGSRNG GSSSEMDTPT KKGENG
001: MENGESNQEN LKSLNHDESL KKPSASSVVV DRLKRDEWSE GAVSTLLEAY ESKWVLRNRA KLKGQDWEDV AKHVSSRATH TKSPKTQTQC KNKIESMKKR
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.