Factsheet for GSMUA_Achr9P22780_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05890_001	Banana	nucleus	53.78	60.46
CDX83751	Canola	nucleus	16.57	43.18
CDY71514	Canola	nucleus	32.85	37.54
CDX73485	Canola	nucleus	32.85	36.81
Bra007069.1-P	Field mustard	nucleus	33.14	36.66
AT3G54390.2	Thale cress	nucleus	33.14	36.54
KXG36174	Sorghum	cytosol	35.76	36.5
VIT_13s0084g00800.t01	Wine grape	nucleus	33.14	35.74
Zm00001d021389_P001	Maize	cytosol	34.59	35.52
Os09t0558200-01	Rice	cytosol	34.3	35.12
Zm00001d006331_P001	Maize	cytosol	34.01	35.03
TraesCS5D01G369500.2	Wheat	nucleus	35.47	34.86
TraesCS5B01G362600.2	Wheat	nucleus	35.17	34.67
KRH20709	Soybean	nucleus	32.85	34.66
HORVU5Hr1G088750.1	Barley	cytosol	15.7	34.62
TraesCS5A01G360100.1	Wheat	nucleus	34.88	34.19
KRH13365	Soybean	nucleus	32.85	33.83
Solyc01g096470.2.1	Tomato	nucleus	33.43	33.53
KRH30077	Soybean	nucleus	32.56	32.84
PGSC0003DMT400013829	Potato	nucleus	32.56	32.56
KRH62829	Soybean	nucleus	33.14	31.32
HORVU5Hr1G088770.7	Barley	nucleus	32.56	30.68
GSMUA_Achr6P04170_001	Banana	nucleus	18.6	23.62
GSMUA_Achr11P...	Banana	plastid	22.09	23.53
GSMUA_Achr11P...	Banana	nucleus	12.79	20.09

Protein Annotations

EnsemblPlants:GSMUA_Achr9P22780_001	EnsemblPlants:GSMUA_Achr9T22780_001	EnsemblPlantsGene:GSMUA_Achr9G22780_001	Gene3D:1.10.10.60	PANTHER:PTHR31307	PANTHER:PTHR31307:SF7
PFAM:PF13837	SEG:seg	UniParc:UPI0002965C6D	UniProt:M0U2N7	MapMan:15.5.20	:

Description

transcription factor like protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G22780_001]

Coordinates

chr9:+:27859575..27863059

Molecular Weight (calculated)

38511.5 Da

IEP (calculated)

7.945

GRAVY (calculated)

-0.849

Length

344 amino acids

Sequence
(BLAST)

001: MILLLIYYTY RRSPSNLIQS DPLFRTFRGS NSLLRVPMDG AHPPTCRDLA PAPALKSPDK GKRDEWSEGG VRCLLEVYES KWVLRNRAKL KGSDWEEIAH
101: HVSVRCSGPK ALKTPTQCKN KIEAMKKRYR SESAAHDPSS GSPWQFYASM DALLKGTGNC AAHPKPNHDA DLPPLPKAEM EVEADGHLHD SNHDDGSNTV
201: PMDININGDN NNETKMENRG TDSHLSAPRS KEAASDDGAR DPNSSSKRRR ILGSEVAESI RLLAQSMLQV ERARLEMYKD SERMRAEAEI KRGEMELKRT
301: EIIAKTQLQI AKLFIEGMRR SSKSSNPSSR TELDMLPEMD GEGD

Best Arabidopsis Sequence Match ( AT3G54390.1 )
(BLAST)

001: MENGESNQEN LKSLNHDESL KKPSASSVVV DRLKRDEWSE GAVSTLLEAY ESKWVLRNRA KLKGQDWEDV AKHVSSRATH TKSPKTQTQC KNKIESMKKR
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.