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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • plasma membrane 1
  • mitochondrion 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana nucleus 32.82 48.4
VIT_15s0021g01220.t01 Wine grape nucleus, plastid 41.49 41.88
KRH50980 Soybean nucleus 15.17 41.18
KRH41794 Soybean nucleus 40.25 40.0
KRH40215 Soybean nucleus 39.01 39.13
CDY48253 Canola nucleus 21.67 39.11
PGSC0003DMT400004269 Potato plastid 37.46 36.78
Solyc01g088820.2.1 Tomato plastid 37.15 36.47
GSMUA_Achr6P04170_001 Banana nucleus 30.03 35.79
CDX74679 Canola nucleus 30.65 32.78
Bra004859.1-P Field mustard nucleus 30.34 32.45
CDX95611 Canola nucleus 34.98 32.01
CDX83420 Canola nucleus 34.67 31.82
KRH01003 Soybean nucleus 26.32 31.48
Bra000360.1-P Field mustard nucleus 34.67 31.46
AT2G44730.1 Thale cress nucleus 33.44 29.03
GSMUA_Achr4P05890_001 Banana nucleus 22.6 23.86
GSMUA_Achr9P22780_001 Banana mitochondrion 23.53 22.09
Protein Annotations
EnsemblPlants:GSMUA_Achr11P17710_001EnsemblPlants:GSMUA_Achr11T17710_001EnsemblPlantsGene:GSMUA_Achr11G17710_001InterPro:IPR006578InterPro:IPR017877InterPro:MADF-dom
InterPro:Myb-like_domncoils:CoilPANTHER:PTHR31307PANTHER:PTHR31307:SF3PFAM:PF13837PFscan:PS50090
SEG:segSMART:SM00595UniParc:UPI000295CF13UniProt:M0RT51MapMan:15.5.20:
Description
transcription factor like protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G17710_001]
Coordinates
chr11:+:19261061..19264037
Molecular Weight (calculated)
36565.8 Da
IEP (calculated)
10.741
GRAVY (calculated)
-0.909
Length
323 amino acids
Sequence
(BLAST)
001: MRSLSKSSAT LHTFMLLNSS SRNLSPSPIP LPASLPPPPH SAVAAASGSR RLAAPIWTHE ETLALIDAYR DKWYALRRGN LRASHWQEVA DDVARRCPSG
101: PSPPKSSVQC RHKVEKLRKR YRSERHKSLQ LDSSLAPASS WVYFRKMDAM EHGGGAVSGP RRPSASPSPA PPRPPSDDDE EEEEEEDDDD YDGRRGTGGG
201: SNTRSMHRLM ANGRGAIGEL RFTIPKAVRS KEMRRKMEKK RRKRRLEMES SAVREMVSAL RMLGDGFLRM EQKKMEMARE MEKVRMEMEL KRTELILDSQ
301: RRIVDAFLKG FSGKKRTKVS PED
Best Arabidopsis Sequence Match ( AT2G44730.1 )
(BLAST)
001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.