Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50980 | Soybean | nucleus | 23.7 | 53.78 |
| KRH40215 | Soybean | nucleus | 62.59 | 52.48 |
| KRH41794 | Soybean | nucleus | 40.37 | 33.54 |
| VIT_15s0021g01220.t01 | Wine grape | nucleus, plastid | 35.19 | 29.69 |
| PGSC0003DMT400004269 | Potato | plastid | 33.7 | 27.66 |
| Solyc01g088820.2.1 | Tomato | plastid | 32.59 | 26.75 |
| GSMUA_Achr11P... | Banana | plastid | 31.48 | 26.32 |
| CDX74679 | Canola | nucleus | 28.89 | 25.83 |
| Bra004859.1-P | Field mustard | nucleus | 28.52 | 25.5 |
| Bra000360.1-P | Field mustard | nucleus | 29.26 | 22.19 |
| CDX83420 | Canola | nucleus | 28.89 | 22.16 |
| KRH66081 | Soybean | cytosol | 22.96 | 22.14 |
| CDX95611 | Canola | nucleus | 28.52 | 21.81 |
| AT2G44730.1 | Thale cress | nucleus | 29.63 | 21.51 |
| KRH07500 | Soybean | cytosol, mitochondrion, nucleus | 20.74 | 21.05 |
| CDY48253 | Canola | nucleus | 10.0 | 15.08 |
| KRH20709 | Soybean | nucleus | 17.41 | 14.42 |
| KRH30077 | Soybean | nucleus | 17.41 | 13.78 |
| KRH13365 | Soybean | nucleus | 16.67 | 13.47 |
| GSMUA_Achr11P... | Banana | nucleus | 10.74 | 13.24 |
| KRH62829 | Soybean | nucleus | 17.04 | 12.64 |
Protein Annotations
| EMBL:ACUP02011489 | EnsemblPlants:KRH01003 | EnsemblPlantsGene:GLYMA_18G248000 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF3 |
| ProteinID:KRH01003 | ProteinID:KRH01003.1 | SEG:seg | UniParc:UPI000233E706 | UniProt:A0A0R0FEQ4 | MapMan:15.5.20 |
Description
hypothetical protein
Coordinates
chr18:-:53508566..53510336
Molecular Weight (calculated)
30043.4 Da
IEP (calculated)
10.418
GRAVY (calculated)
-1.031
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLPRPHQPE GYPLARGGRR RHRAVPQRLP HGENRRAVPP QDGEAPQTLP HRNPTRGATS PSPAGGDANT NSPSSWVHFK SMDSMEKGPN HKPHSDINNN
101: LNFHDDDDDD YLYEEFKTAP GSNTNTRSLN KLYKNNNGFN SGGSGSGSGF RIRIPAGVPQ QQHTASSNKI FNSHLPPGIV PRGGGVKRER ERDAVAEMVE
201: AIKVLRDGFV RMEQMKMEMA REIESMRMEM EMKRTEMILD SQQRIVEAFA MAVSQKRSKG KSTPSPSSQP
101: LNFHDDDDDD YLYEEFKTAP GSNTNTRSLN KLYKNNNGFN SGGSGSGSGF RIRIPAGVPQ QQHTASSNKI FNSHLPPGIV PRGGGVKRER ERDAVAEMVE
201: AIKVLRDGFV RMEQMKMEMA REIESMRMEM EMKRTEMILD SQQRIVEAFA MAVSQKRSKG KSTPSPSSQP
001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.