CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13365	Soybean	nucleus	79.75	77.84
VIT_13s0084g00800.t01	Wine grape	nucleus	60.74	62.07
KRH30077	Soybean	nucleus	64.42	61.58
KRH62829	Soybean	nucleus	63.8	57.14
CDY71514	Canola	nucleus	50.0	54.15
CDX73485	Canola	nucleus	49.69	52.77
AT3G54390.2	Thale cress	nucleus	49.08	51.28
Bra007069.1-P	Field mustard	nucleus	48.77	51.13
CDX83751	Canola	nucleus	19.63	48.48
PGSC0003DMT400013829	Potato	nucleus	49.08	46.51
Solyc01g096470.2.1	Tomato	nucleus	48.77	46.36
GSMUA_Achr4P05890_001	Banana	nucleus	36.2	38.56
GSMUA_Achr9P22780_001	Banana	mitochondrion	34.66	32.85
Zm00001d006331_P001	Maize	cytosol	31.29	30.54
Os09t0558200-01	Rice	cytosol	31.29	30.36
Zm00001d021389_P001	Maize	cytosol	30.67	29.85
KXG36174	Sorghum	cytosol	30.37	29.38
HORVU5Hr1G088750.1	Barley	cytosol	13.8	28.85
TraesCS5B01G362600.2	Wheat	nucleus	30.67	28.65
TraesCS5D01G369500.2	Wheat	nucleus	30.67	28.57
TraesCS5A01G360100.1	Wheat	nucleus	30.67	28.49
HORVU5Hr1G088770.7	Barley	nucleus	31.29	27.95
KRH50980	Soybean	nucleus	9.51	26.05
KRH07500	Soybean	cytosol, mitochondrion, nucleus	18.4	22.56
KRH41794	Soybean	nucleus	21.17	21.23
KRH40215	Soybean	nucleus	20.55	20.81
KRH66081	Soybean	cytosol	17.48	20.36
KRH01003	Soybean	nucleus	14.42	17.41

Protein Annotations

EMBL:ACUP02008293	EnsemblPlants:KRH20709	EnsemblPlantsGene:GLYMA_13G195800	EntrezGene:100784245	ncoils:Coil	PANTHER:PTHR31307
PANTHER:PTHR31307:SF7	PFAM:PF13837	ProteinID:KRH20709	ProteinID:KRH20709.1	SEG:seg	UniParc:UPI000233C19F
UniProt:I1M0R0	MapMan:15.5.20	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:30928265..30932209

Molecular Weight (calculated)

36578.1 Da

IEP (calculated)

8.986

GRAVY (calculated)

-0.945

Length

326 amino acids

Sequence
(BLAST)

001: MGVDDEQEME EEEEEEREEE KKKHKQAPPS LFPISVRKGF SGERVKRDEW SEGAVSTLLE AYEAKWVLRN RAKLKGHDWE DVARHVSSRA NCTKSPKTST
101: QCKNKVESMK KRYRSESATA DHASSSWPLY SRLDLLLRGT GPVFSSPPGP LMVAAPMPPL SPVEPSQPLA PSGPLANAQN SHGSNGVDEK LAKEDGLGTK
201: SSDQVSSKNP LDTDSSTPAL YSQKEELRSN KRKKKTIDHN TGRRRKEYVE IAESLRWLAE AMIRSEQARM DTMKEIERMR VEAEAKRGEM DLKRTEIIAN
301: TQLEIARIFA SVNSKGVDSS LRIGRS

Best Arabidopsis Sequence Match ( AT3G54390.2 )
(BLAST)

001: MFNSIHSLKS HLKKKYMENG ESNQENLKSL NHDESLKKPS ASSVVVDRLK RDEWSEGAVS TLLEAYESKW VLRNRAKLKG QDWEDVAKHV SSRATHTKSP
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.