Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G369500.2 | Wheat | nucleus | 93.45 | 93.71 |
| TraesCS5B01G362600.2 | Wheat | nucleus | 81.48 | 81.95 |
| HORVU5Hr1G088770.7 | Barley | nucleus | 64.1 | 61.64 |
| Os09t0558200-01 | Rice | cytosol | 51.57 | 53.87 |
| Zm00001d006331_P001 | Maize | cytosol | 50.43 | 52.99 |
| KXG36174 | Sorghum | cytosol | 49.57 | 51.63 |
| Zm00001d021389_P001 | Maize | cytosol | 49.0 | 51.34 |
| CDX83751 | Canola | nucleus | 14.53 | 38.64 |
| GSMUA_Achr4P05890_001 | Banana | nucleus | 33.33 | 38.24 |
| Bra007069.1-P | Field mustard | nucleus | 31.34 | 35.37 |
| CDY71514 | Canola | nucleus | 30.2 | 35.22 |
| GSMUA_Achr9P22780_001 | Banana | mitochondrion | 34.19 | 34.88 |
| CDX73485 | Canola | nucleus | 30.48 | 34.85 |
| AT3G54390.2 | Thale cress | nucleus | 29.63 | 33.33 |
| Solyc01g096470.2.1 | Tomato | nucleus | 31.91 | 32.65 |
| VIT_13s0084g00800.t01 | Wine grape | nucleus | 29.06 | 31.97 |
| KRH20709 | Soybean | nucleus | 28.49 | 30.67 |
| PGSC0003DMT400013829 | Potato | nucleus | 29.91 | 30.52 |
| KRH13365 | Soybean | nucleus | 28.49 | 29.94 |
| KRH30077 | Soybean | nucleus | 27.07 | 27.86 |
| KRH62829 | Soybean | nucleus | 28.49 | 27.47 |
| TraesCS1A01G216300.1 | Wheat | nucleus | 19.09 | 21.0 |
| TraesCS4A01G315300.1 | Wheat | nucleus | 17.66 | 20.13 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G360100.1 | EnsemblPlantsGene:TraesCS5A01G360100 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF7 | PFAM:PF13837 | SEG:seg |
| MapMan:15.5.20 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:561810561..561812858
Molecular Weight (calculated)
37330.5 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.732
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLPDGAAP PAPTPQQQQP KRDEWSESGI SRLLEAYEAK WLLRNRAKLK WSDWVDIAHD VSAHCSSSDH AASKPGAAAG GTAKTPNQCK NKVESMKKRY
101: RAESAAATRA GSAGVASASG GPSWRFFGRM DGLLKGPAAG CSGQPQAQPE PSYDGIVQPR APLKAEPEVD AEADTALQQP PDTAGPPGAL SELLSADANG
201: SATVKAEKTV DLATHKESGR AADSDAANVS SPRSKEVEVG VNDDGAEEVD TPRKRKSPEL DVARSIELLA SSFVKIERAR LEVYRDTERM RAEAEVKKGE
301: MELRRTEIMA KTQLQIARLF AKRLKECVGS RNGGSSSQAD TLAKKGENGS G
101: RAESAAATRA GSAGVASASG GPSWRFFGRM DGLLKGPAAG CSGQPQAQPE PSYDGIVQPR APLKAEPEVD AEADTALQQP PDTAGPPGAL SELLSADANG
201: SATVKAEKTV DLATHKESGR AADSDAANVS SPRSKEVEVG VNDDGAEEVD TPRKRKSPEL DVARSIELLA SSFVKIERAR LEVYRDTERM RAEAEVKKGE
301: MELRRTEIMA KTQLQIARLF AKRLKECVGS RNGGSSSQAD TLAKKGENGS G
001: MFNSIHSLKS HLKKKYMENG ESNQENLKSL NHDESLKKPS ASSVVVDRLK RDEWSEGAVS TLLEAYESKW VLRNRAKLKG QDWEDVAKHV SSRATHTKSP
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.