CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30077	Soybean	nucleus	72.8	77.71
KRH20709	Soybean	nucleus	57.14	63.8
KRH13365	Soybean	nucleus	58.24	63.47
VIT_13s0084g00800.t01	Wine grape	nucleus	52.75	60.19
CDY71514	Canola	nucleus	47.53	57.48
CDX73485	Canola	nucleus	48.35	57.33
AT3G54390.2	Thale cress	nucleus	46.43	54.17
Bra007069.1-P	Field mustard	nucleus	46.15	54.02
Solyc01g096470.2.1	Tomato	nucleus	46.98	49.85
CDX83751	Canola	nucleus	17.86	49.24
PGSC0003DMT400013829	Potato	nucleus	45.88	48.55
GSMUA_Achr4P05890_001	Banana	nucleus	33.24	39.54
GSMUA_Achr9P22780_001	Banana	mitochondrion	31.32	33.14
Zm00001d006331_P001	Maize	cytosol	28.3	30.84
Zm00001d021389_P001	Maize	cytosol	28.02	30.45
Os09t0558200-01	Rice	cytosol	28.02	30.36
KXG36174	Sorghum	cytosol	27.75	29.97
TraesCS5B01G362600.2	Wheat	nucleus	28.3	29.51
HORVU5Hr1G088750.1	Barley	cytosol	12.64	29.49
TraesCS5D01G369500.2	Wheat	nucleus	27.47	28.57
TraesCS5A01G360100.1	Wheat	nucleus	27.47	28.49
HORVU5Hr1G088770.7	Barley	nucleus	27.47	27.4
KRH50980	Soybean	nucleus	8.52	26.05
KRH07500	Soybean	cytosol, mitochondrion, nucleus	16.76	22.93
KRH41794	Soybean	nucleus	19.51	21.85
KRH40215	Soybean	nucleus	19.23	21.74
KRH66081	Soybean	cytosol	15.93	20.71
KRH01003	Soybean	nucleus	12.64	17.04

Protein Annotations

EMBL:ACUP02002369	EnsemblPlants:KRH62829	EnsemblPlantsGene:GLYMA_04G135400	EntrezGene:100799917	ncoils:Coil	PANTHER:PTHR31307
PANTHER:PTHR31307:SF7	PFAM:PF13837	ProteinID:KRH62829	ProteinID:KRH62829.1	SEG:seg	UniParc:UPI000233A83E
UniProt:K7KJY7	MapMan:15.5.20	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:19962935..19966532

Molecular Weight (calculated)

40216.4 Da

IEP (calculated)

10.299

GRAVY (calculated)

-0.886

Length

364 amino acids

Sequence
(BLAST)

001: MEDNNNNNNK AEKQQDDSSH HPSLLLPKPN HSTINNIKED HHQSPRKLAI GGGGGGSGDR LKRDEWSEGA VTTLLEAYEA KWVHRNRAKL KGHDWEDVAK
101: HVSARANSTK SPKTQTQCKN KIESMKKRYR SESATTADAS SWPLYSRLDV LLRGTGLISS SLPPPIAATA IAAPSQSPHA TINNNQALVL LEPPSLAVLQ
201: APPSVAPPPI AIAQNSHGPN GVERLLAKED GIGAKSSEQV SNKNPMDSDS STPALYSKKD KVRCNKRKMK SENNNKRRRN NNNNNEDVEI AKSIRWLAEV
301: VVRSEQTRMD TMKEIERMRV EAEAKRGEME LKRTEIIANT QLEIARIFAS VNKGVDSSLR IGRS

Best Arabidopsis Sequence Match ( AT3G54390.2 )
(BLAST)

001: MFNSIHSLKS HLKKKYMENG ESNQENLKSL NHDESLKKPS ASSVVVDRLK RDEWSEGAVS TLLEAYESKW VLRNRAKLKG QDWEDVAKHV SSRATHTKSP
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.