Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71514 | Canola | nucleus | 91.0 | 94.02 |
| AT3G54390.2 | Thale cress | nucleus | 59.81 | 59.62 |
| VIT_13s0084g00800.t01 | Wine grape | nucleus | 56.27 | 54.86 |
| KRH20709 | Soybean | nucleus | 51.13 | 48.77 |
| KRH30077 | Soybean | nucleus | 52.73 | 48.09 |
| KRH13365 | Soybean | nucleus | 51.13 | 47.6 |
| Solyc01g096470.2.1 | Tomato | nucleus | 51.77 | 46.94 |
| KRH62829 | Soybean | nucleus | 54.02 | 46.15 |
| PGSC0003DMT400013829 | Potato | nucleus | 50.48 | 45.64 |
| GSMUA_Achr4P05890_001 | Banana | nucleus | 38.59 | 39.22 |
| GSMUA_Achr9P22780_001 | Banana | mitochondrion | 36.66 | 33.14 |
| KXG36174 | Sorghum | cytosol | 34.73 | 32.05 |
| Os09t0558200-01 | Rice | cytosol | 34.41 | 31.85 |
| Zm00001d006331_P001 | Maize | cytosol | 33.76 | 31.44 |
| TraesCS5D01G369500.2 | Wheat | nucleus | 35.37 | 31.43 |
| HORVU5Hr1G088750.1 | Barley | cytosol | 15.76 | 31.41 |
| Zm00001d021389_P001 | Maize | cytosol | 33.76 | 31.34 |
| TraesCS5A01G360100.1 | Wheat | nucleus | 35.37 | 31.34 |
| TraesCS5B01G362600.2 | Wheat | nucleus | 35.05 | 31.23 |
| HORVU5Hr1G088770.7 | Barley | nucleus | 35.37 | 30.14 |
| Bra004859.1-P | Field mustard | nucleus | 22.51 | 23.18 |
| Bra000360.1-P | Field mustard | nucleus | 23.47 | 20.51 |
| Bra015090.1-P | Field mustard | nucleus | 18.65 | 19.53 |
| Bra040110.1-P | Field mustard | cytosol | 20.58 | 15.5 |
Protein Annotations
Description
AT3G54390 (E=1e-056) | transcription factor
Coordinates
chrA09:-:27139845..27141229
Molecular Weight (calculated)
34981.5 Da
IEP (calculated)
9.870
GRAVY (calculated)
-0.925
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGDSNQEH PQPLPTNHDA SSPKKPSTSS IVVDRLKRDE WSEGAVSSLL EAYETKWALR NRAKLKGQDW EDVARHVSSR ASHTKSPKTQ TQCKNKIESM
101: KKRYRSESAT AEGSSWPLYS RLDHLLRGNA STSVHPQPQP QPQAVLPLNC SAPLLLLEPP LAAVTHPPQQ PPAAQMSHGS NGVGTIKEEG FKDDHKPERA
201: TEMDTDSSTP VLCREKAKVR PKKVRRRYKE EKEEIAGSIR WLAEVVMRTE RARMETMKEI ERMRAEAEVK RGEMDLKRTE IMANTQIEIA RLFAASVHKG
301: GVDSSLRIGR N
101: KKRYRSESAT AEGSSWPLYS RLDHLLRGNA STSVHPQPQP QPQAVLPLNC SAPLLLLEPP LAAVTHPPQQ PPAAQMSHGS NGVGTIKEEG FKDDHKPERA
201: TEMDTDSSTP VLCREKAKVR PKKVRRRYKE EKEEIAGSIR WLAEVVMRTE RARMETMKEI ERMRAEAEVK RGEMDLKRTE IMANTQIEIA RLFAASVHKG
301: GVDSSLRIGR N
001: MFNSIHSLKS HLKKKYMENG ESNQENLKSL NHDESLKKPS ASSVVVDRLK RDEWSEGAVS TLLEAYESKW VLRNRAKLKG QDWEDVAKHV SSRATHTKSP
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.