Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74679 | Canola | nucleus | 98.34 | 98.34 |
| Bra000360.1-P | Field mustard | nucleus | 62.91 | 53.37 |
| AT2G44730.1 | Thale cress | nucleus | 56.95 | 46.24 |
| KRH50980 | Soybean | nucleus | 17.22 | 43.7 |
| KRH41794 | Soybean | nucleus | 45.7 | 42.46 |
| KRH40215 | Soybean | nucleus | 42.72 | 40.06 |
| PGSC0003DMT400004269 | Potato | plastid | 43.38 | 39.82 |
| VIT_15s0021g01220.t01 | Wine grape | nucleus, plastid | 42.05 | 39.69 |
| Solyc01g088820.2.1 | Tomato | plastid | 41.72 | 38.3 |
| GSMUA_Achr11P... | Banana | plastid | 32.45 | 30.34 |
| GSMUA_Achr11P... | Banana | nucleus | 21.52 | 29.68 |
| KRH01003 | Soybean | nucleus | 25.5 | 28.52 |
| Bra015090.1-P | Field mustard | nucleus | 24.83 | 25.25 |
| Bra040110.1-P | Field mustard | cytosol | 32.78 | 23.97 |
| Bra007069.1-P | Field mustard | nucleus | 23.18 | 22.51 |
Protein Annotations
Description
AT2G44730 (E=1e-046) | transcription factor
Coordinates
chrA05:-:2158462..2159370
Molecular Weight (calculated)
33621.5 Da
IEP (calculated)
9.950
GRAVY (calculated)
-0.747
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDPDSPPTH DPIPDRDQPE PASATDPKLP SVPKSSRRLP PPCWSLEETT ALIDGYREKW HALGRGNLKA NHWEDVAEAV AAACPGVAPR KTAVQCRHKM
101: EKLRQRYRAE IQRARSVPVA RFVSSWVHYK RMEAMEITKP DSEENQFSGG CPTPRFFNRN GGGGGGGIRI RIPTGVSIAQ PGPRIEPKSF GISTNPRPGR
201: VVGTGSSYGA RVVGGGSEMK MMCDDPIGSA IKLLGDAMLR TEEKKMEMTR EIEGMRMEME MKRTKMVLES QQRIVEAFAR TMSENLEEEK KMKKARRMSS
301: VE
101: EKLRQRYRAE IQRARSVPVA RFVSSWVHYK RMEAMEITKP DSEENQFSGG CPTPRFFNRN GGGGGGGIRI RIPTGVSIAQ PGPRIEPKSF GISTNPRPGR
201: VVGTGSSYGA RVVGGGSEMK MMCDDPIGSA IKLLGDAMLR TEEKKMEMTR EIEGMRMEME MKRTKMVLES QQRIVEAFAR TMSENLEEEK KMKKARRMSS
301: VE
001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.