Factsheet for AT2G44730.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95611	Canola	nucleus	57.53	60.62
CDY48253	Canola	nucleus	28.76	59.78
CDX83420	Canola	nucleus	54.03	57.1
Bra004859.1-P	Field mustard	nucleus	46.24	56.95
CDX74679	Canola	nucleus	46.24	56.95
Bra000360.1-P	Field mustard	nucleus	53.49	55.9
KRH41794	Soybean	nucleus	38.44	44.0
VIT_15s0021g01220.t01	Wine grape	nucleus, plastid	36.56	42.5
KRH50980	Soybean	nucleus	13.44	42.02
KRH40215	Soybean	nucleus	35.48	40.99
PGSC0003DMT400004269	Potato	plastid	36.02	40.73
Solyc01g088820.2.1	Tomato	plastid	34.95	39.51
GSMUA_Achr11P...	Banana	plastid	29.03	33.44
GSMUA_Achr11P...	Banana	nucleus	17.74	30.14
KRH01003	Soybean	nucleus	21.51	29.63
AT3G54390.2	Thale cress	nucleus	18.82	22.44
AT3G24860.1	Thale cress	nucleus	18.55	22.26
AT4G17060.1	Thale cress	nucleus	13.98	16.77

Protein Annotations

MapMan:15.5.20	EntrezGene:819080	ProteinID:AAC27475.1	ProteinID:AEC10459.1	ArrayExpress:AT2G44730	EnsemblPlantsGene:AT2G44730
RefSeq:AT2G44730	TAIR:AT2G44730	RefSeq:AT2G44730-TAIR-G	EnsemblPlants:AT2G44730.1	TAIR:AT2G44730.1	Unigene:At.36721
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019748	GO:GO:0019760	GO:GO:0043565	GO:GO:0044212	InterPro:IPR006578	InterPro:IPR017877
InterPro:MADF-dom	InterPro:Myb-like_dom	RefSeq:NP_182001.1	UniProt:O80512	PFAM:PF13837	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50090
PANTHER:PTHR31307	PANTHER:PTHR31307:SF3	SMART:SM00595	UniParc:UPI00000A534D	SEG:seg	:

Description

Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]

Coordinates

chr2:-:18437333..18438565

Molecular Weight (calculated)

40784.0 Da

IEP (calculated)

9.443

GRAVY (calculated)

-0.825

Length

372 amino acids

Sequence
(BLAST)

001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.