Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48253 | Canola | nucleus | 29.68 | 36.31 |
| GSMUA_Achr11P... | Banana | plastid | 48.4 | 32.82 |
| KRH41794 | Soybean | nucleus | 35.16 | 23.69 |
| VIT_15s0021g01220.t01 | Wine grape | nucleus, plastid | 32.88 | 22.5 |
| KRH40215 | Soybean | nucleus | 32.88 | 22.36 |
| Bra004859.1-P | Field mustard | nucleus | 29.68 | 21.52 |
| CDX74679 | Canola | nucleus | 29.22 | 21.19 |
| Solyc01g088820.2.1 | Tomato | plastid | 31.05 | 20.67 |
| PGSC0003DMT400004269 | Potato | plastid | 31.05 | 20.67 |
| GSMUA_Achr6P04170_001 | Banana | nucleus | 25.57 | 20.66 |
| CDX83420 | Canola | nucleus | 32.42 | 20.17 |
| Bra000360.1-P | Field mustard | nucleus | 32.42 | 19.94 |
| CDX95611 | Canola | nucleus | 31.51 | 19.55 |
| AT2G44730.1 | Thale cress | nucleus | 30.14 | 17.74 |
| GSMUA_Achr4P05890_001 | Banana | nucleus | 18.26 | 13.07 |
| GSMUA_Achr9P22780_001 | Banana | mitochondrion | 20.09 | 12.79 |
| KRH01003 | Soybean | nucleus | 13.24 | 10.74 |
| KRH50980 | Soybean | nucleus | 5.02 | 9.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P00260_001 | EnsemblPlants:GSMUA_Achr11T00260_001 | EnsemblPlantsGene:GSMUA_Achr11G00260_001 | InterPro:IPR006578 | InterPro:MADF-dom | PANTHER:PTHR31307 |
| PANTHER:PTHR31307:SF3 | PFAM:PF13837 | SEG:seg | SMART:SM00595 | UniParc:UPI00029540A2 | UniProt:M0RN57 |
| MapMan:15.5.20 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G00260_001]
Coordinates
chr11:-:126295..126954
Molecular Weight (calculated)
24310.4 Da
IEP (calculated)
10.228
GRAVY (calculated)
-0.910
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSVDASSP KKDPPSPAVL AASAAAEAAA SRCQSPSPSP SPSPERSASL LPLPASLPPP LPSSSATRRL AAPIWTHEEI LALIGAYRDK WYALRRGNLR
101: ASHWQEVADD VADRCPPGSS PPKTYIQCRH KVEKLRKRYR SERRKSLQFD TSLPPSSWVY FRKMHATEHG GNVEVGETHR PSDCQSSVPP HPPSSDDGWR
201: REQHPKSPPP HDQRRLRDR
101: ASHWQEVADD VADRCPPGSS PPKTYIQCRH KVEKLRKRYR SERRKSLQFD TSLPPSSWVY FRKMHATEHG GNVEVGETHR PSDCQSSVPP HPPSSDDGWR
201: REQHPKSPPP HDQRRLRDR
001: MSDPDSPMNH DPIPDPSPLA PLPPPLSSSA HDDASTEPAS NTDLKSASIP TASKNSRRLP PPCWSLEETI ALIDAYRDKW YALNRGNLKA NHWEEVAEAV
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
101: GANCPDVILK KTAVQCRHKM EKLRKRYRTE IQRARSVPVA RFISSWVHFK RMEAMENRPE IKQGNESGDD DDHDDGNYTA RYQFSGGGGG ARTTPRFFNR
201: NGTAGSGGGG GSSSSGGIRI RIPTGVSIAQ PGPRFPGKID QKYTASPSAG VSSNPRAGRG IGAGGSSYGA RVVRIPEGGG KRGREMMMKT EEDDNDPMVE
301: IASAIKLLGD TLVRTEQTRM EMTREIEAMR MDTEMKRTKM ILESQQRIVE AFAKSLSDYT TTEEQDKKKK AR
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:O80512]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.