Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36174 | Sorghum | cytosol | 70.83 | 70.62 |
| Zm00001d021389_P001 | Maize | cytosol | 70.24 | 70.45 |
| Zm00001d006331_P001 | Maize | cytosol | 64.88 | 65.27 |
| TraesCS5B01G362600.2 | Wheat | nucleus | 55.36 | 53.3 |
| TraesCS5D01G369500.2 | Wheat | nucleus | 53.87 | 51.71 |
| TraesCS5A01G360100.1 | Wheat | nucleus | 53.87 | 51.57 |
| HORVU5Hr1G088750.1 | Barley | cytosol | 22.02 | 47.44 |
| HORVU5Hr1G088770.7 | Barley | nucleus | 49.4 | 45.48 |
| GSMUA_Achr4P05890_001 | Banana | nucleus | 37.2 | 40.85 |
| CDX83751 | Canola | nucleus | 15.77 | 40.15 |
| CDX73485 | Canola | nucleus | 32.44 | 35.5 |
| CDY71514 | Canola | nucleus | 31.55 | 35.22 |
| Bra007069.1-P | Field mustard | nucleus | 31.85 | 34.41 |
| GSMUA_Achr9P22780_001 | Banana | mitochondrion | 35.12 | 34.3 |
| AT3G54390.2 | Thale cress | nucleus | 30.95 | 33.33 |
| PGSC0003DMT400013829 | Potato | nucleus | 32.74 | 31.98 |
| VIT_13s0084g00800.t01 | Wine grape | nucleus | 29.76 | 31.35 |
| KRH20709 | Soybean | nucleus | 30.36 | 31.29 |
| KRH30077 | Soybean | nucleus | 31.25 | 30.79 |
| Solyc01g096470.2.1 | Tomato | nucleus | 31.25 | 30.61 |
| KRH13365 | Soybean | nucleus | 30.06 | 30.24 |
| KRH62829 | Soybean | nucleus | 30.36 | 28.02 |
| Os10t0564200-01 | Rice | nucleus | 19.35 | 19.35 |
| Os08t0484700-01 | Rice | nucleus | 16.37 | 17.46 |
Protein Annotations
| EMBL:AK103673 | EnsemblPlants:Os09t0558200-01 | EnsemblPlantsGene:Os09g0558200 | EntrezGene:4347833 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF7 |
| PFAM:PF13837 | ProteinID:BAD45940.1 | ProteinID:BAF25824.1 | ProteinID:BAT09375.1 | RefSeq:XP_015612002.1 | SEG:seg |
| UniParc:UPI000043A455 | UniProt:Q653S1 | MapMan:15.5.20 | : | : | : |
Description
Homeodomain-like containing protein. (Os09t0558200-01);Homeodomain-like containing protein. (Os09t0558200-02)
Coordinates
chr9:+:22188092..22191579
Molecular Weight (calculated)
36337.8 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.593
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALPDAADA AQLAAAAAPP QKRDEWSESG IVRLLEAYEA KWLLRNRAKL KWSDWVDIAH EVSAHCAMEN AAATGKPGSS TAKTPNQCKN KIESMKKRYR
101: AESAAAARAG PAAAGAGPSW RFFARMDGLL KGPAGSGQPQ AELSNSIDLR APPPAKVEVD VDADFVSQLA DAGPGALSEL VSAYANGSIQ EKLDKVENSG
201: HVEGRAAESD VNVSSPRIKE ANEDAEEVDK VWDMSKKRKN TEFDIAKSIE LLASSFLKIE RARMDLYRET ERMRVEAEIK KGEMELKRTE IMAKTHLQIA
301: KLFAKRLKEC SSKTGGSSSV TAEVDNHAKK GENGSG
101: AESAAAARAG PAAAGAGPSW RFFARMDGLL KGPAGSGQPQ AELSNSIDLR APPPAKVEVD VDADFVSQLA DAGPGALSEL VSAYANGSIQ EKLDKVENSG
201: HVEGRAAESD VNVSSPRIKE ANEDAEEVDK VWDMSKKRKN TEFDIAKSIE LLASSFLKIE RARMDLYRET ERMRVEAEIK KGEMELKRTE IMAKTHLQIA
301: KLFAKRLKEC SSKTGGSSSV TAEVDNHAKK GENGSG
001: MENGESNQEN LKSLNHDESL KKPSASSVVV DRLKRDEWSE GAVSTLLEAY ESKWVLRNRA KLKGQDWEDV AKHVSSRATH TKSPKTQTQC KNKIESMKKR
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN
101: YRSESATADG SSWPLYPRLD HLLRGTQPQP QPQAVLPLNC SVPLLLLEPP LPAVAHPPQI SYGSNGVGKI PKEDGFKPEN KPEKDAEMDT DSSTPVVKTK
201: VRGKKVKRRY KEEKEEIAGS IRWLAEVVMR SERARMETMK EIERMRAEAE AKRGELDLKR TEIMANTQLE IARIFAAAAS SGQNKGVDSS LRIGRN
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.