CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62829	Soybean	nucleus	77.71	72.8
KRH20709	Soybean	nucleus	61.58	64.42
KRH13365	Soybean	nucleus	62.46	63.77
VIT_13s0084g00800.t01	Wine grape	nucleus	55.72	59.56
CDY71514	Canola	nucleus	49.56	56.15
CDX73485	Canola	nucleus	49.85	55.37
Bra007069.1-P	Field mustard	nucleus	48.09	52.73
AT3G54390.2	Thale cress	nucleus	47.8	52.24
CDX83751	Canola	nucleus	19.65	50.76
Solyc01g096470.2.1	Tomato	nucleus	48.68	48.4
PGSC0003DMT400013829	Potato	nucleus	48.39	47.97
GSMUA_Achr4P05890_001	Banana	nucleus	35.48	39.54
GSMUA_Achr9P22780_001	Banana	mitochondrion	32.84	32.56
Os09t0558200-01	Rice	cytosol	30.79	31.25
KXG36174	Sorghum	cytosol	30.21	30.56
Zm00001d006331_P001	Maize	cytosol	29.33	29.94
Zm00001d021389_P001	Maize	cytosol	29.33	29.85
HORVU5Hr1G088750.1	Barley	cytosol	13.49	29.49
KRH50980	Soybean	nucleus	10.26	29.41
TraesCS5B01G362600.2	Wheat	nucleus	28.74	28.08
HORVU5Hr1G088770.7	Barley	nucleus	29.91	27.95
TraesCS5D01G369500.2	Wheat	nucleus	27.86	27.14
TraesCS5A01G360100.1	Wheat	nucleus	27.86	27.07
KRH07500	Soybean	cytosol, mitochondrion, nucleus	17.89	22.93
KRH41794	Soybean	nucleus	21.7	22.77
KRH40215	Soybean	nucleus	20.82	22.05
KRH66081	Soybean	cytosol	17.3	21.07
KRH01003	Soybean	nucleus	13.78	17.41

Protein Annotations

EMBL:ACUP02006871	EnsemblPlants:KRH30077	EnsemblPlantsGene:GLYMA_11G156700	EntrezGene:100813972	ncoils:Coil	PANTHER:PTHR31307
PANTHER:PTHR31307:SF7	PFAM:PF13837	ProteinID:KRH30076.1	ProteinID:KRH30077	ProteinID:KRH30077.1	SEG:seg
UniParc:UPI000233D44F	UniProt:I1LLG2	MapMan:15.5.20	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:13755557..13758440

Molecular Weight (calculated)

38253.9 Da

IEP (calculated)

9.900

GRAVY (calculated)

-0.953

Length

341 amino acids

Sequence
(BLAST)

001: MEDNNNNNNN KAEKQQDDSS HHHPSLLLPN PNHSTTINNN TKEDHHHRLK RDEWSEGAVT TLLEAYEAKW VLRNRAKLKG HDWEDVAKHV SARANSTKSP
101: KTQTQCKNKI ESMKKRYRSE SATTADASSS WPLYSRLDVL LRGTAPISSS LSPPPIAAAR PIIAAPSSQS PHNQALVLLE PPPSVAPPPI AIAQNSYGSN
201: GVERLLAKED GIGAKSSEHV SNKNPMDSDS STPALYSEKD KVRCNKRKMK SENNKRRRNN NNEDMEIVES IRWLAEMVVR SEQTRMDTMK EIERMRVEAE
301: AKRGEMELKR TEIIANTQLE IAKIFASVNK GVDSSLRIGR S

Best Arabidopsis Sequence Match ( AT3G54390.2 )
(BLAST)

001: MFNSIHSLKS HLKKKYMENG ESNQENLKSL NHDESLKKPS ASSVVVDRLK RDEWSEGAVS TLLEAYESKW VLRNRAKLKG QDWEDVAKHV SSRATHTKSP
101: KTQTQCKNKI ESMKKRYRSE SATADGSSWP LYPRLDHLLR GTQPQPQPQA VLPLNCSVPL LLLEPPLPAV AHPPQISYGS NGVGKIPKED GFKPENKPEK
201: DAEMDTDSST PVVKTKVRGK KVKRRYKEEK EEIAGSIRWL AEVVMRSERA RMETMKEIER MRAEAEAKRG ELDLKRTEIM ANTQLEIARI FAAAASSGQN
301: KGVDSSLRIG RN

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.