Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d002690_P001 | |
| Zm00001d017526_P001 | |
| Zm00001d051403_P001 | |
| Zm00001d051872_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010435_P001 | Maize | mitochondrion | 100.0 | 100.0 |
| Zm00001d052497_P001 | Maize | extracellular, plasma membrane, vacuole | 100.0 | 7.74 |
| Os09t0529350-01 | Rice | plastid | 91.67 | 5.56 |
| EER97075 | Sorghum | golgi, mitochondrion, plastid | 100.0 | 3.91 |
| Zm00001d021242_P001 | Maize | plastid | 100.0 | 3.9 |
| TraesCS5A01G316300.1 | Wheat | mitochondrion, plastid | 91.67 | 3.72 |
| TraesCS5B01G316800.1 | Wheat | mitochondrion, plastid | 91.67 | 3.72 |
| TraesCS5D01G322500.1 | Wheat | mitochondrion, plastid | 83.33 | 3.38 |
| GSMUA_Achr9P00850_001 | Banana | plastid | 66.67 | 2.57 |
| VIT_02s0025g02450.t01 | Wine grape | plastid | 66.67 | 2.54 |
| PGSC0003DMT400031912 | Potato | cytosol | 50.0 | 2.32 |
| KRH40927 | Soybean | plastid | 50.0 | 2.05 |
| Solyc08g083010.2.1 | Tomato | plastid | 50.0 | 1.93 |
| AT4G24090.1 | Thale cress | plastid | 41.67 | 1.62 |
| Bra013761.1-P | Field mustard | plastid | 41.67 | 1.59 |
Protein Annotations
| EnsemblPlants:Zm00001d044473_P001 | EnsemblPlants:Zm00001d044473_T001 | EnsemblPlantsGene:Zm00001d044473 | ProteinID:AQK94044.1 | ProteinID:ONM41269.1 | UniParc:UPI000843C79B |
| UniProt:A0A1D6NM37 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:229110501..229111025
Molecular Weight (calculated)
1563.0 Da
IEP (calculated)
12.807
GRAVY (calculated)
-1.133
Length
12 amino acids
Sequence
(BLAST)
(BLAST)
1: MRFLSPFPRR KQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.