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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d002690_P001
Zm00001d017526_P001
Zm00001d051403_P001
Zm00001d051872_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24090.1 Zm00001d002690_P001 AT1G01620.1 21798944
AT4G24090.1 Zm00001d017526_P001 AT1G01620.1 21798944
AT4G24090.1 Zm00001d051403_P001 AT1G01620.1 21798944
AT4G24090.1 Zm00001d051872_P001 AT1G01620.1 21798944
AT4G24090.1 Zm00001d002690_P001 AT3G61430.1 21798944
AT4G24090.1 Zm00001d017526_P001 AT3G61430.1 21798944
AT4G24090.1 Zm00001d051403_P001 AT3G61430.1 21798944
AT4G24090.1 Zm00001d051872_P001 AT3G61430.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d010435_P001 Maize mitochondrion 7.74 100.0
Zm00001d044473_P001 Maize mitochondrion 7.74 100.0
Os09t0529350-01 Rice plastid 58.06 45.45
EER97075 Sorghum golgi, mitochondrion, plastid 71.61 36.16
Zm00001d021242_P001 Maize plastid 71.61 36.04
TraesCS5A01G316300.1 Wheat mitochondrion, plastid 59.35 31.08
TraesCS5B01G316800.1 Wheat mitochondrion, plastid 58.71 30.74
TraesCS5D01G322500.1 Wheat mitochondrion, plastid 58.06 30.41
PGSC0003DMT400031912 Potato cytosol 43.87 26.25
GSMUA_Achr9P00850_001 Banana plastid 44.52 22.19
Solyc08g083010.2.1 Tomato plastid 43.87 21.86
VIT_02s0025g02450.t01 Wine grape plastid 43.23 21.27
AT4G24090.1 Thale cress plastid 41.94 21.1
KRH40927 Soybean plastid 39.35 20.82
Bra013761.1-P Field mustard plastid 40.65 20.06
Protein Annotations
EnsemblPlants:Zm00001d052497_P001EnsemblPlants:Zm00001d052497_T001EnsemblPlantsGene:Zm00001d052497GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR36383ProteinID:AQK57350.1TMHMM:TMhelixUniParc:UPI0008442084UniProt:A0A1D6QHK4MapMan:35.2
Description
No Description!
Coordinates
chr4:+:191488833..191489709
Molecular Weight (calculated)
17218.4 Da
IEP (calculated)
8.611
GRAVY (calculated)
0.670
Length
155 amino acids
Sequence
(BLAST)
001: MAEIAPRSVL HDGKVRSVGA CCIRVFVFCK NRVTVGPISF YQVEDLPQLF LRSSIVFISC ALFGVTCWYA VRRDLDNIQL ETGPPATFAF VRVLALLESG
101: RTLVLSIDTL ISVISVTLDA AVSVVDNILI FLPAAVALDY CFKMRFLSPF PRRKQ
Best Arabidopsis Sequence Match ( AT4G24090.1 )
(BLAST)
001: MQSLSLQSLP WKPNSVTLPE INLLNPKQLT ASSSQYRRTR NWRIRSSSED NVAISSDGGD LKNSLSGIVG NQVEELLSRE ENKGLLDGLE KASLRVEIAK
101: RELEDIERQE IEAKLLQDYI NQLESRAAEI AECQQEIDAA RSMVEEAERS LSLADNSTIG SSEKGYSIDK DKERLESAKA AVIAAAVGTI AELPFALSQV
201: ASMEQLVLPL GIAFASCALF GVTFRYAVRR DLDDNHLKSG AVAAFGFVKG LGMLSRGPPL ELSWESLFSH GIDGAVLVSQ SVLIFAFASI GLDFCFKMKL
301: LRPFPSSD
Arabidopsis Description
At4g24090 [Source:UniProtKB/TrEMBL;Acc:Q5XEV6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.