Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015583.1-P | Field mustard | cytosol | 60.98 | 58.82 |
| CDY06711 | Canola | cytosol | 60.98 | 58.82 |
| CDY71405 | Canola | cytosol | 60.98 | 58.82 |
| CDX86476 | Canola | cytosol | 54.88 | 57.69 |
| CDY10280 | Canola | cytosol | 59.76 | 57.65 |
| Bra030687.1-P | Field mustard | cytosol | 58.54 | 56.47 |
| CDY15615 | Canola | cytosol | 58.54 | 56.47 |
| TraesCS5D01G495900.1 | Wheat | cytosol | 42.68 | 39.33 |
| AT5G02220.1 | Thale cress | cytosol, nucleus, plastid | 34.15 | 38.89 |
| TraesCS5B01G495400.1 | Wheat | nucleus | 39.02 | 38.55 |
| GSMUA_Achr6P17910_001 | Banana | nucleus | 35.37 | 37.66 |
| TraesCS3D01G354800.1 | Wheat | cytosol | 37.8 | 37.35 |
| TraesCS5A01G482300.1 | Wheat | nucleus | 40.24 | 37.08 |
| Os03t0822400-01 | Rice | nucleus | 40.24 | 37.08 |
| TraesCS3B01G393400.1 | Wheat | cytosol | 36.59 | 36.59 |
| EER93180 | Sorghum | cytosol | 41.46 | 36.56 |
| HORVU3Hr1G086110.1 | Barley | cytosol | 35.37 | 36.25 |
| TraesCS3A01G361000.1 | Wheat | cytosol | 35.37 | 35.8 |
| GSMUA_Achr2P16400_001 | Banana | cytosol | 36.59 | 34.48 |
| Zm00001d042902_P001 | Maize | cytosol | 37.8 | 34.44 |
| Os01t0843700-01 | Rice | cytosol | 37.8 | 33.33 |
| Zm00001d012956_P001 | Maize | cytosol | 37.8 | 32.63 |
| HORVU5Hr1G113790.1 | Barley | cytosol, nucleus | 41.46 | 30.91 |
| HORVU5Hr1G113780.1 | Barley | cytosol, nucleus | 41.46 | 30.09 |
| KXG33680 | Sorghum | mitochondrion | 37.8 | 25.62 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:837264 | UniProt:A0A178WFJ5 | ProteinID:AAF79549.1 | ProteinID:AEE28136.2 | ArrayExpress:AT1G07500 |
| EnsemblPlantsGene:AT1G07500 | RefSeq:AT1G07500 | TAIR:AT1G07500 | RefSeq:AT1G07500-TAIR-G | EnsemblPlants:AT1G07500.1 | TAIR:AT1G07500.1 |
| GO:GO:0003674 | GO:GO:0004860 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006469 |
| GO:GO:0006950 | GO:GO:0006974 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0030234 | RefSeq:NP_001318942.1 | ProteinID:OAP16213.1 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0009047 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF15 | UniProt:Q9LNX4 | UniParc:UPI00000A1590 | SEG:seg |
Description
SMR5Cyclin-dependent protein kinase inhibitor SMR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNX4]
Coordinates
chr1:-:2304766..2305031
Molecular Weight (calculated)
9212.8 Da
IEP (calculated)
5.048
GRAVY (calculated)
-0.843
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MEEKNYDDGD TVTVDDDYQM GCTTPTRDDC RIPAYPPCPP PVRRKRSLLG FGKKREPPKK GYFQPPDLDL FFSVVAASQA AT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.