Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009606.1-P | Field mustard | nucleus | 87.5 | 86.3 |
| CDY10460 | Canola | nucleus | 87.5 | 86.3 |
| CDY40340 | Canola | nucleus | 87.5 | 86.3 |
| CDY04845 | Canola | nucleus | 69.44 | 68.49 |
| Bra028880.1-P | Field mustard | nucleus | 68.06 | 67.12 |
| CDY48103 | Canola | nucleus | 69.44 | 65.79 |
| GSMUA_Achr6P17910_001 | Banana | nucleus | 52.78 | 49.35 |
| KRH49124 | Soybean | cytosol, nucleus, plastid | 44.44 | 49.23 |
| TraesCS5B01G495400.1 | Wheat | nucleus | 54.17 | 46.99 |
| TraesCS5A01G482300.1 | Wheat | nucleus | 52.78 | 42.7 |
| Os03t0822400-01 | Rice | nucleus | 51.39 | 41.57 |
| TraesCS5D01G495900.1 | Wheat | cytosol | 51.39 | 41.57 |
| GSMUA_Achr2P16400_001 | Banana | cytosol | 48.61 | 40.23 |
| HORVU3Hr1G086110.1 | Barley | cytosol | 44.44 | 40.0 |
| TraesCS3B01G393400.1 | Wheat | cytosol | 43.06 | 37.8 |
| EER93180 | Sorghum | cytosol | 48.61 | 37.63 |
| TraesCS3D01G354800.1 | Wheat | cytosol | 43.06 | 37.35 |
| TraesCS3A01G361000.1 | Wheat | cytosol | 41.67 | 37.04 |
| Zm00001d012956_P001 | Maize | cytosol | 47.22 | 35.79 |
| Zm00001d042902_P001 | Maize | cytosol | 44.44 | 35.56 |
| HORVU5Hr1G113790.1 | Barley | cytosol, nucleus | 54.17 | 35.45 |
| HORVU5Hr1G113780.1 | Barley | cytosol, nucleus | 54.17 | 34.51 |
| Os01t0843700-01 | Rice | cytosol | 44.44 | 34.41 |
| AT1G07500.1 | Thale cress | cytosol | 38.89 | 34.15 |
| KXG33680 | Sorghum | mitochondrion | 43.06 | 25.62 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:831792 | UniProt:A0A178UKH9 | ProteinID:AED90446.1 | ArrayExpress:AT5G02220 | EnsemblPlantsGene:AT5G02220 |
| RefSeq:AT5G02220 | TAIR:AT5G02220 | RefSeq:AT5G02220-TAIR-G | EnsemblPlants:AT5G02220.1 | TAIR:AT5G02220.1 | EMBL:AY085350 |
| EMBL:BT025305 | ProteinID:CAB82995.1 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0030234 | RefSeq:NP_568097.1 | ProteinID:OAO93787.1 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009046 | PO:PO:0020100 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF15 | UniProt:Q1JPP8 | UniParc:UPI000016243F |
Description
SMR4Cyclin-dependent protein kinase inhibitor SMR4 [Source:UniProtKB/Swiss-Prot;Acc:Q1JPP8]
Coordinates
chr5:-:441452..442187
Molecular Weight (calculated)
8324.2 Da
IEP (calculated)
9.317
GRAVY (calculated)
-0.760
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MEVVERKTEM AEEGCTTPRS TMYRIPVASV CPPPPRKKLM VVRKRDPPRN GYFQPPDLET LFYAQPRREA CA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.