Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016017.1-P | Field mustard | mitochondrion, plastid | 85.88 | 88.12 |
| CDY59936 | Canola | plastid | 86.57 | 87.79 |
| CDX96450 | Canola | plastid | 84.95 | 86.97 |
| VIT_09s0018g01270.t01 | Wine grape | extracellular | 52.78 | 79.17 |
| PGSC0003DMT400036879 | Potato | extracellular | 52.08 | 76.53 |
| HORVU0Hr1G005570.3 | Barley | cytosol | 38.89 | 74.01 |
| GSMUA_Achr10P... | Banana | plastid | 67.82 | 69.76 |
| KRH23699 | Soybean | plastid | 68.52 | 69.16 |
| Solyc03g117850.2.1 | Tomato | plastid | 70.37 | 68.78 |
| Os04t0658300-01 | Rice | plastid | 70.14 | 68.71 |
| OQU82488 | Sorghum | plastid | 66.9 | 66.74 |
| TraesCS2A01G501200.1 | Wheat | plastid | 67.82 | 66.14 |
| TraesCS2B01G529300.1 | Wheat | plastid | 67.82 | 65.99 |
| TraesCS2D01G501700.1 | Wheat | plastid | 67.82 | 65.99 |
| Zm00001d001995_P003 | Maize | plastid | 66.67 | 62.61 |
| AT2G39730.1 | Thale cress | plastid | 41.2 | 37.55 |
Protein Annotations
| Gene3D:1.10.8.1070 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:843642 | ProteinID:AEE35415.1 | EMBL:AF361834 |
| EMBL:AK118942 | ArrayExpress:AT1G73110 | EnsemblPlantsGene:AT1G73110 | RefSeq:AT1G73110 | TAIR:AT1G73110 | RefSeq:AT1G73110-TAIR-G |
| EnsemblPlants:AT1G73110.1 | TAIR:AT1G73110.1 | InterPro:ATPase_AAA_core | EMBL:AY078044 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
| GO:GO:0016787 | RefSeq:NP_177454.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR32429 | PANTHER:PTHR32429:SF11 | UniProt:Q9AST9 |
| SUPFAM:SSF52540 | UniParc:UPI00000ABFB4 | SEG:seg | : | : | : |
Description
At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
Coordinates
chr1:-:27494121..27496969
Molecular Weight (calculated)
48327.8 Da
IEP (calculated)
7.483
GRAVY (calculated)
-0.376
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.