Factsheet for Os04t0658300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G005570.3	Barley	cytosol	43.54	84.58
OQU82488	Sorghum	plastid	79.37	80.83
VIT_09s0018g01270.t01	Wine grape	extracellular	51.02	78.12
TraesCS2D01G501700.1	Wheat	plastid	78.23	77.7
TraesCS2A01G501200.1	Wheat	plastid	78.0	77.65
TraesCS2B01G529300.1	Wheat	plastid	77.55	77.03
Zm00001d001995_P003	Maize	plastid	80.27	76.96
GSMUA_Achr10P...	Banana	plastid	71.66	75.24
PGSC0003DMT400036879	Potato	extracellular	49.89	74.83
Bra016017.1-P	Field mustard	mitochondrion, plastid	67.8	71.02
CDY59936	Canola	plastid	67.8	70.19
CDX96450	Canola	plastid	67.12	70.14
AT1G73110.1	Thale cress	plastid	68.71	70.14
KRH23699	Soybean	plastid	67.8	69.86
Solyc03g117850.2.1	Tomato	plastid	66.89	66.74
Os11t0707000-02	Rice	plastid	41.5	42.26
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	12.24	27.0
Os11t0707050-00	Rice	cytosol, nucleus, plastid	1.81	11.11

Protein Annotations

Gene3D:1.10.8.1070	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4337267	InterPro:ATPase_AAA_core	ProteinID:BAF16042.1
ProteinID:BAS91423.1	ProteinID:CAE04234.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	EnsemblPlantsGene:Os04g0658300	EnsemblPlants:Os04t0658300-01	InterPro:P-loop_NTPase
PFAM:PF00004	PANTHER:PTHR32429	PANTHER:PTHR32429:SF11	UniProt:Q7XN85	SUPFAM:SSF52540	UniParc:UPI000021C824
RefSeq:XP_015636564.1	SEG:seg	:	:	:	:

Description

Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA). (Os04t0658300-01)

Coordinates

chr4:-:33575152..33579653

Molecular Weight (calculated)

49090.5 Da

IEP (calculated)

6.291

GRAVY (calculated)

-0.408

Length

441 amino acids

Sequence
(BLAST)

001: MATATATSLA SSAAHRRLPP SRSAASSILR APNRGRLCPG SPSVLRASSS SPSSPQPTAG GDEGEEEEEG RRLSKQSSWE AKDSEGDDYL YRLGKEADNM
101: NIAVGARSGI VDDLFVGNFL GKDSDIVFDY RQKATRTFEY LQGDYYIAPL FLDKVACHIV KNYLAHILTI KIPLILGIWG GKGQGKTFQT ELIFRAMGVE
201: PVIMSAGELE SEKAGEPGRL IRDRYRTASQ VIQNQGKMSV LMINDLDAGV GRFGNTQMTV NNQIVIGTLM NLADNPTRVS IGQKWRESDV THRVPIIVTG
301: NDFSTLYAPL IRDGRMEKFY WQPGREDIIN IVHRMYIKDG LSFEDVSKVV DTFPNQALDF YGALRSRTYD RAILQWVEEI GGHEQLNEKL LKRKKGEELP
401: TFIPPKTTVD ALIESGDSLV KEQELIMNSK LSKEYMKNLD D

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.