Factsheet for TraesCS2B01G529300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G501700.1	Wheat	plastid	97.97	97.97
HORVU0Hr1G005570.3	Barley	cytosol	49.77	97.36
TraesCS2A01G501200.1	Wheat	plastid	96.85	97.07
Os04t0658300-01	Rice	plastid	77.03	77.55
VIT_09s0018g01270.t01	Wine grape	extracellular	49.77	76.74
OQU82488	Sorghum	plastid	73.65	75.52
PGSC0003DMT400036879	Potato	extracellular	49.1	74.15
GSMUA_Achr10P...	Banana	plastid	69.14	73.1
Zm00001d001995_P003	Maize	plastid	74.32	71.74
Bra016017.1-P	Field mustard	mitochondrion, plastid	64.64	68.17
KRH23699	Soybean	plastid	65.54	67.99
AT1G73110.1	Thale cress	plastid	65.99	67.82
CDX96450	Canola	plastid	63.96	67.3
CDY59936	Canola	plastid	64.41	67.14
Solyc03g117850.2.1	Tomato	plastid	65.77	66.06
TraesCS4B01G140200.1	Wheat	plastid	40.99	42.13
TraesCS4B01G140300.1	Wheat	plastid	41.44	39.66

Protein Annotations

Gene3D:1.10.8.1070	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	InterPro:P-loop_NTPase
PFAM:PF00004	PANTHER:PTHR32429	PANTHER:PTHR32429:SF11	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2B01G529300	EnsemblPlants:TraesCS2B01G529300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:724397715..724402899

Molecular Weight (calculated)

49637.2 Da

IEP (calculated)

7.220

GRAVY (calculated)

-0.408

Length

444 amino acids

Sequence
(BLAST)

001: MAATSLAAAS RCHRHHILLP ALASPGCFNH RTPNRRRICP AFPSVLCSSS SSASPQPTAG GEEEAEDGEE GRGRRLSKQS SWEATDGQGD DYLYRLGKEA
101: DNMNIAVGAR SGIVDDLFVG KFLGRDSDIV FDYRQKATRK FEYLQGDYYI APAFLDKVAV HIVKNFLANN LNIKIPLILG VWGGKGQGKT FQTELIFKAM
201: GVEPVIMSAG ELESERAGEP GRLIRDRYRT ASQVVQNQGK MSCLMINDLD AGLGRFGHTQ MTVNNQIVVG TLMNLADNPN RVSIGQKWRE SDITHRIPII
301: ATGNDFSTLY APLIRDGRME KFYWQPTRED IINIVHRMYT KDGLSFEEVS SIVDTFPNQA LDFYGALRSR TYDQAILQWV NDIGGYEQLG EKLLKRKNRE
401: KLPTFIPPKP TLDALIQSGN SLVEEQAFVM NSNLSKEYMK NLED

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.