Factsheet for VIT_09s0018g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036879	Potato	extracellular	82.64	80.95
HORVU0Hr1G005570.3	Barley	cytosol	60.42	76.65
KRH23699	Soybean	plastid	88.54	59.58
GSMUA_Achr10P...	Banana	plastid	81.6	55.95
Bra016017.1-P	Field mustard	mitochondrion, plastid	79.51	54.39
CDX96450	Canola	plastid	79.51	54.27
CDY59936	Canola	plastid	79.86	53.99
Solyc03g117850.2.1	Tomato	plastid	81.6	53.17
AT1G73110.1	Thale cress	plastid	79.17	52.78
OQU82488	Sorghum	plastid	77.08	51.27
Os04t0658300-01	Rice	plastid	78.12	51.02
TraesCS2A01G501200.1	Wheat	plastid	77.08	50.11
TraesCS2D01G501700.1	Wheat	plastid	77.08	50.0
TraesCS2B01G529300.1	Wheat	plastid	76.74	49.77
Zm00001d001995_P003	Maize	plastid	78.47	49.13
VIT_13s0019g02050.t01	Wine grape	plastid	52.78	34.7
VIT_08s0007g00840.t01	Wine grape	plastid	54.86	33.33
VIT_06s0004g05180.t01	Wine grape	plastid	54.17	33.05

Protein Annotations

Gene3D:1.10.8.1070	EntrezGene:100263841	wikigene:100263841	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core
ProteinID:CCB49696	ProteinID:CCB49696.1	UniProt:F6HBT1	EMBL:FN595513	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EntrezGene:LOC100263841	wikigene:LOC100263841	InterPro:P-loop_NTPase	PFAM:PF00004
PANTHER:PTHR32429	PANTHER:PTHR32429:SF11	SUPFAM:SSF52540	UniParc:UPI00021095D3	ArrayExpress:VIT_09s0018g01270	EnsemblPlantsGene:VIT_09s0018g01270
EnsemblPlants:VIT_09s0018g01270.t01	RefSeq:XP_002270825	RefSeq:XP_002270825.1	:	:	:

Description

No Description!

Coordinates

chr9:-:18173199..18223356

Molecular Weight (calculated)

32589.3 Da

IEP (calculated)

6.303

GRAVY (calculated)

-0.331

Length

288 amino acids

Sequence
(BLAST)

001: MAMCHIVKNY IAHLLNTNVP LILGIWGGKG QGKSFQTELI FQAMGIEPVI MSAGELESER AGEPGKLIRE RYRTASQVVQ NQGKMSCLMI NDIDAGIGRF
101: GNTQVTVNNQ IAVGTLMNLS DNPTRVSIGQ DWRETDITNR VPIIVTGNDF STIYAPLIRD GRMDKFYWQP THEDIINIVD RMYEKDGISR DAVVRIVDTF
201: PNQALDFYGA LRSRTYDRSI SKWVDDIGGV ENLGNKLLRR RKDEKLPVFV PPKQTIDALL ESGYSLIKEQ QLIMETKLSK EYMKNIDD

Best Arabidopsis Sequence Match ( AT1G73110.2 )
(BLAST)

001: MTLIVELTEL VYICEFAADI VFDYRQKATR SFEHLQGDYY IAPSFLDKVA VHIVKNYLAP SLNIKIPLIL GIWGGKGQGK TFQTELIFKT MGVEPVIMSA
101: GELESDRAGE PGRLIRDRYR TASQVIQNQG KMSVLMINDI DAGLGRFGET QMTVNNQIVV GTLMNLADNP TRVSVGQEWR EADMVNRVPL IVTGNDFSTL
201: YAPLIREGRM EKFYWQPTRE DIVNIVSRMY EKDGISRKDV ISIVDKFPNQ ALDFYGALRS RTYDRSILKW VDEAGGMETL GKVLLRRKKT QEVPQFTAPE
301: QTVEALLESG YSLINEQKLI METKLSKEYM KNMDD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.