Factsheet for GSMUA_Achr10P30850_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g01270.t01	Wine grape	extracellular	55.95	81.6
HORVU0Hr1G005570.3	Barley	cytosol	43.1	79.74
PGSC0003DMT400036879	Potato	extracellular	54.76	78.23
Os04t0658300-01	Rice	plastid	75.24	71.66
KRH23699	Soybean	plastid	72.86	71.5
OQU82488	Sorghum	plastid	73.33	71.13
TraesCS2D01G501700.1	Wheat	plastid	73.33	69.37
TraesCS2A01G501200.1	Wheat	plastid	73.1	69.3
TraesCS2B01G529300.1	Wheat	plastid	73.1	69.14
Bra016017.1-P	Field mustard	mitochondrion, plastid	69.29	69.12
CDX96450	Canola	plastid	69.05	68.72
Solyc03g117850.2.1	Tomato	plastid	71.9	68.33
CDY59936	Canola	plastid	69.29	68.31
AT1G73110.1	Thale cress	plastid	69.76	67.82
Zm00001d001995_P003	Maize	plastid	72.62	66.3
GSMUA_Achr10P...	Banana	plastid	40.0	41.28
GSMUA_Achr11P...	Banana	plasma membrane, plastid	42.38	40.64
GSMUA_Achr2P16450_001	Banana	plastid	42.38	37.47

Protein Annotations

Gene3D:1.10.8.1070	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	EnsemblPlantsGene:GSMUA_Achr10G30850_001
EnsemblPlants:GSMUA_Achr10P30850_001	EnsemblPlants:GSMUA_Achr10T30850_001	UniProt:M0RMV9	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR32429
PANTHER:PTHR32429:SF11	SUPFAM:SSF52540	UniParc:UPI000295FA7A	SEG:seg	:	:

Description

Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G30850_001]

Coordinates

chr10:+:33067564..33085172

Molecular Weight (calculated)

47405.7 Da

IEP (calculated)

6.945

GRAVY (calculated)

-0.358

Length

420 amino acids

Sequence
(BLAST)

001: MAVVSSFHSA LLPFSSPSIP IPILNPVNCE KRRRWTSYST RLQCSSCPDE AKRISEQSSW ESKDSEGKDY LYRLGQEADN MNIAVGARQG VIDDLFVGNF
101: LGKDSDIVFD YRQKATRSFE YLQGDYYIAP AFLVACHIVK NYIAHLLNVK VPLILGIWGG KGQGKTFQTE LIFRAMGIEP VIMSAGELES ERAGEPGRLI
201: RDRYRTASQV IQNQGKMSCL MINDIDAGLG RFGNTQMTVN NQIVVGTLMN LSDNPTRVSI GQKWRESDVV HRVPIIVTGN DFSTLYAPLI RDGRMEKFYW
301: QPDHEDIINI VHQMYAKDGI TRDEVIRVVD TFPNQALDFY GALRSKTYDQ SILQWVNDTG GYEKLGEKLL KGKKDGQLST FVPPKQSVEA LLESGHSLVK
401: EQHLITNSRL SKEYMKNIDD

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.