Factsheet for GSMUA_Achr2P16450_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	78.11	91.15
GSMUA_Achr11P...	Banana	plasma membrane, plastid	83.58	90.64
VIT_08s0007g00840.t01	Wine grape	plastid	84.63	84.81
VIT_06s0004g05180.t01	Wine grape	plastid	83.37	83.9
VIT_13s0019g02050.t01	Wine grape	plastid	76.42	82.88
KRH73060	Soybean	nucleus, plastid	82.95	82.43
KRH65878	Soybean	plastid	81.89	82.07
KRH15079	Soybean	nucleus, plastid	82.53	82.01
KRG97874	Soybean	plastid	75.58	81.04
Os11t0707000-02	Rice	plastid	73.68	80.83
CDY07640	Canola	plastid	80.42	80.42
CDY24950	Canola	plastid	80.42	80.42
AT2G39730.1	Thale cress	plastid	79.79	79.96
CDY20474	Canola	plastid	78.74	79.91
TraesCS4A01G177600.1	Wheat	plastid	72.63	79.86
TraesCS4D01G134900.1	Wheat	plastid	72.63	79.86
CDX74838	Canola	plastid	78.53	79.7
KRH31002	Soybean	nucleus, plastid	74.32	79.68
TraesCS4B01G140200.1	Wheat	plastid	72.42	79.63
Bra005019.1-P	Field mustard	plastid	79.58	79.58
Bra000144.1-P	Field mustard	plastid	79.37	79.37
CDX93240	Canola	plastid	73.26	79.27
PGSC0003DMT400028767	Potato	plastid	73.05	79.22
Bra017055.1-P	Field mustard	plastid	73.47	78.78
Solyc09g011080.2.1	Tomato	plastid	72.21	78.13
PGSC0003DMT400049256	Potato	cytosol, plastid	71.58	77.8
Zm00001d048593_P001	Maize	plastid	70.74	77.6
TraesCS4A01G177500.1	Wheat	plastid	75.37	77.16
TraesCS4D01G135000.9	Wheat	plastid	75.37	77.16
TraesCS4B01G140300.1	Wheat	plastid	75.37	77.16
Zm00001d048592_P001	Maize	plastid	74.53	76.46
Os11t0707050-00	Rice	cytosol, nucleus, plastid	11.58	76.39
EES10316	Sorghum	plastid	70.74	76.36
Solyc10g086580.1.1	Tomato	plastid	70.95	75.73
EES10317	Sorghum	plastid	75.37	75.69
HORVU4Hr1G027260.12	Barley	cytosol	69.26	70.6
KRH75848	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	15.79	63.56
CDY68720	Canola	cytosol	15.58	61.67
CDY21872	Canola	cytosol	15.79	58.59
KRH55240	Soybean	cytosol	9.05	52.44
GSMUA_Achr10P...	Banana	plastid	37.47	42.38
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	16.42	39.0
PGSC0003DMT400091016	Potato	plastid	12.63	32.61

Protein Annotations

EnsemblPlants:GSMUA_Achr2P16450_001	EnsemblPlants:GSMUA_Achr2T16450_001	EnsemblPlantsGene:GSMUA_Achr2G16450_001	Gene3D:1.10.8.1070	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR32429
PANTHER:PTHR32429:SF12	PFAM:PF00004	SEG:seg	SUPFAM:SSF52540	UniParc:UPI00029528B5	UniProt:M0S8I6
MapMan:1.2.1.3.2	:	:	:	:	:

Description

Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G16450_001]

Coordinates

chr2:-:17309315..17312304

Molecular Weight (calculated)

51765.8 Da

IEP (calculated)

5.371

GRAVY (calculated)

-0.261

Length

475 amino acids

Sequence
(BLAST)

001: MAAAVSTIGA VNRVPLSLHG SSSGASIPSS VFLGSSLKKV NSVPSHGRVP TRTFKVLAAD LDESKQTEKD RWAGLAYDVS DDQQDITRGK GLADSLFQAP
101: TGDGTHEAVL SSYEYISQGL RQYNLDNTMD GFYIAPAFMD KLVVHISKNF MNLPNIKVPL ILGIWGGKGQ GKSFQCELVF AKMGINPIMM SAGELESGNA
201: GEPAKLIRQR YREAAEIIKK GKMCCLFIND LDAGAGRLGG TTQYTVNNQM VNATLMNIAD NPTNVQLPGM YNKQENPRVP IIVTGNDFST LYAPLIRDGR
301: MEKFYWAPTR EDRIGVCAGI FRTDNVAKED IVKLVDSFPG QSIDFFGAVR ARVYDDEVRK WVAEIGVESV NKKLVNSLEG PPTFDQPKMS LAKLMEYGNM
401: LVKEQENVKR VQLADKYLSE AALGDANEDA INTGQFYGKA AQQVGVPVPE GCTDPIATNF DPTARSDDGS CLYPV

Best Arabidopsis Sequence Match ( AT2G39730.1 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKGA QQVNLPVPEG CTDPVAENFD PTARSDDGTC VYNF

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.