CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g00840.t01	Wine grape	plastid	85.23	85.23
GSMUA_Achr10P...	Banana	plastid	71.52	83.29
KRH15079	Soybean	nucleus, plastid	83.97	83.26
GSMUA_Achr11P...	Banana	plasma membrane, plastid	76.16	82.42
KRG97874	Soybean	plastid	77.0	82.39
KRH73060	Soybean	nucleus, plastid	82.91	82.22
GSMUA_Achr2P16450_001	Banana	plastid	82.07	81.89
KRH31002	Soybean	nucleus, plastid	76.37	81.72
AT2G39730.1	Thale cress	plastid	78.69	78.69
Bra005019.1-P	Field mustard	plastid	78.48	78.32
Bra000144.1-P	Field mustard	plastid	78.27	78.11
Os11t0707000-02	Rice	plastid	71.31	78.06
Bra017055.1-P	Field mustard	plastid	72.78	77.88
Zm00001d048593_P001	Maize	plastid	70.89	77.6
TraesCS4A01G177600.1	Wheat	plastid	70.04	76.85
TraesCS4B01G140200.1	Wheat	plastid	70.04	76.85
TraesCS4D01G134900.1	Wheat	plastid	70.04	76.85
EES10316	Sorghum	plastid	70.25	75.68
TraesCS4A01G177500.1	Wheat	plastid	74.05	75.65
TraesCS4D01G135000.9	Wheat	plastid	74.05	75.65
Zm00001d048592_P001	Maize	plastid	73.84	75.59
TraesCS4B01G140300.1	Wheat	plastid	73.84	75.43
EES10317	Sorghum	plastid	74.26	74.42
Os11t0707050-00	Rice	cytosol, nucleus, plastid	11.18	73.61
KRH75848	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	17.72	71.19
HORVU4Hr1G027260.12	Barley	cytosol	67.72	68.88
KRH55240	Soybean	cytosol	11.18	64.63
KRH23699	Soybean	plastid	37.34	41.36
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	16.46	39.0

Protein Annotations

Gene3D:1.10.8.1070	MapMan:1.2.1.3.2	EntrezGene:100795298	Gene3D:3.40.50.300	EMBL:ACUP02001709	InterPro:ATPase_AAA_core
UniProt:D4N5G1	EnsemblPlantsGene:GLYMA_03G068100	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009536
GO:GO:0009570	GO:GO:0009579	GO:GO:0030234	GO:GO:0043085	GO:GO:0046863	EMBL:GQ917181
EnsemblPlants:KRH65878	ProteinID:KRH65878	ProteinID:KRH65878.1	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR32429
PANTHER:PTHR32429:SF12	SUPFAM:SSF52540	UniParc:UPI0001CD8CAE	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:14160330..14163828

Molecular Weight (calculated)

52272.2 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.376

Length

474 amino acids

Sequence
(BLAST)

001: MAASVPTVGA VNIAQLKLNG SSSRVTSSPF FGTSLKKVNS ESSSQRGVCR NFKVSAQIEY DEEKQTSKDR WGGLAYDTSD DQQDITRGKG MVDTLFQAPM
101: ESGTHYAVMS SYDYISAGLR QYNLDNTMDG FYIAPAFMDK IVVHITKNFL NLPNIKVPLI LGIWGGKGQG KSFQCELVFA KMGINPIVMS AGELESGNAG
201: EPAKLIRQRY REAADIIRKG KMCCLFINDL DAGAGRLGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENPRVPI IVTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRD DRIGVCQGIF RTDGVLKEDI IKLVDTFLGQ SIDFFGALRA RVYDDEVRKW ISGVGVENIG KKLVNSKEGP PTFEQPKMTL SKLLEYGNML
401: VQEQENVKRV QLADKYLNEA ALGDANDDAI KTGNFYGQGA QQVHVPVPEG CTDPTAENYD PTARSDDGSC TYKF

Best Arabidopsis Sequence Match ( AT2G39730.1 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKGA QQVNLPVPEG CTDPVAENFD PTARSDDGTC VYNF

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.