CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75848	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.63	44.92
CDY58991	Canola	cytosol	28.05	28.05
PGSC0003DMT400091016	Potato	plastid	29.27	13.04
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	30.49	12.5
KRH31002	Soybean	nucleus, plastid	63.41	11.74
KRH73060	Soybean	nucleus, plastid	68.29	11.72
KRG97874	Soybean	plastid	62.2	11.51
KRH15079	Soybean	nucleus, plastid	65.85	11.3
KRH65878	Soybean	plastid	64.63	11.18
VIT_06s0004g05180.t01	Wine grape	plastid	63.41	11.02
Os11t0707000-02	Rice	plastid	54.88	10.39
Solyc10g086580.1.1	Tomato	plastid	56.1	10.34
GSMUA_Achr11P...	Banana	plasma membrane, plastid	54.88	10.27
Solyc09g011080.2.1	Tomato	plastid	54.88	10.25
TraesCS4B01G140200.1	Wheat	plastid	53.66	10.19
TraesCS4A01G177600.1	Wheat	plastid	53.66	10.19
TraesCS4D01G134900.1	Wheat	plastid	53.66	10.19
TraesCS4A01G177500.1	Wheat	plastid	57.32	10.13
TraesCS4D01G135000.9	Wheat	plastid	57.32	10.13
EES10316	Sorghum	plastid	53.66	10.0
Bra017055.1-P	Field mustard	plastid	53.66	9.93
Zm00001d048593_P001	Maize	plastid	52.44	9.93
TraesCS4B01G140300.1	Wheat	plastid	56.1	9.91
HORVU4Hr1G027260.12	Barley	cytosol	54.88	9.66
AT2G39730.1	Thale cress	plastid	54.88	9.49
Bra005019.1-P	Field mustard	plastid	54.88	9.47
Bra000144.1-P	Field mustard	plastid	54.88	9.47
Zm00001d048592_P001	Maize	plastid	51.22	9.07
GSMUA_Achr2P16450_001	Banana	plastid	52.44	9.05
EES10317	Sorghum	plastid	50.0	8.67
Os11t0707050-00	Rice	cytosol, nucleus, plastid	7.32	8.33
GSMUA_Achr10P...	Banana	plastid	36.59	7.37
KRH23699	Soybean	plastid	32.93	6.31

Protein Annotations

EMBL:ACUP02003935	EnsemblPlants:KRH55240	EnsemblPlantsGene:GLYMA_06G239400	Gene3D:1.10.8.1070	GO:GO:0003674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0030234	GO:GO:0043085	GO:GO:0046863	PANTHER:PTHR32429	PANTHER:PTHR32429:SF12
ProteinID:KRH55240	ProteinID:KRH55240.1	UniParc:UPI0002955025	UniProt:K7KX10	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr6:-:39363690..39364378

Molecular Weight (calculated)

9617.8 Da

IEP (calculated)

10.229

GRAVY (calculated)

-0.235

Length

82 amino acids

Sequence
(BLAST)

1: MSLHYNKTNG MQFMIDFFGA LRARVYDDEV RKWISVVGVD FIGKKLVNLM TLSKLLEYGN MLVQEQKNRD QGAPRFRVQF VN

Best Arabidopsis Sequence Match ( AT2G39730.2 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE EKEPSK

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.