Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68720 | Canola | cytosol | 57.32 | 39.17 |
| CDY21872 | Canola | cytosol | 58.54 | 37.5 |
| KRH75848 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 45.12 | 31.36 |
| KRH55240 | Soybean | cytosol | 28.05 | 28.05 |
| CDX93240 | Canola | plastid | 60.98 | 11.39 |
| CDY07640 | Canola | plastid | 58.54 | 10.11 |
| CDY24950 | Canola | plastid | 58.54 | 10.11 |
| CDY20474 | Canola | plastid | 57.32 | 10.04 |
| CDX74838 | Canola | plastid | 57.32 | 10.04 |
| PGSC0003DMT400091016 | Potato | plastid | 20.73 | 9.24 |
| KRH31002 | Soybean | nucleus, plastid | 47.56 | 8.8 |
| Solyc10g086580.1.1 | Tomato | plastid | 47.56 | 8.76 |
| KRG97874 | Soybean | plastid | 46.34 | 8.58 |
| VIT_06s0004g05180.t01 | Wine grape | plastid | 48.78 | 8.47 |
| Solyc09g011080.2.1 | Tomato | plastid | 45.12 | 8.43 |
| KRH73060 | Soybean | nucleus, plastid | 46.34 | 7.95 |
| KRH15079 | Soybean | nucleus, plastid | 46.34 | 7.95 |
| CDX96450 | Canola | plastid | 24.39 | 4.74 |
| CDY59936 | Canola | plastid | 24.39 | 4.69 |
Protein Annotations
| EnsemblPlants:CDY58991 | EnsemblPlantsGene:GSBRNA2T00025431001 | Gene3D:1.10.8.1070 | PANTHER:PTHR32429 | PANTHER:PTHR32429:SF12 | ProteinID:CDY58991 |
| ProteinID:CDY58991.1 | UniParc:UPI0004EE027B | UniProt:A0A078J0X7 | MapMan:35.1 | : | : |
Description
BnaC08g49440DBnaC08g49440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0X7]
Coordinates
chrLK033717:-:388..711
Molecular Weight (calculated)
9344.5 Da
IEP (calculated)
7.258
GRAVY (calculated)
-0.270
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MFVGALRARV YDDEVRKFVE GLGVEKISKR LVNSREGPPV FEQPEMTLEK LMEYGNMLVM EQENVKRVQL HCVTCVAGKS AQ
001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE V
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE V
Arabidopsis Description
RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.