CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016017.1-P	Field mustard	mitochondrion, plastid	95.97	96.2
CDY59936	Canola	plastid	96.68	95.77
AT1G73110.1	Thale cress	plastid	86.97	84.95
VIT_09s0018g01270.t01	Wine grape	extracellular	54.27	79.51
PGSC0003DMT400036879	Potato	extracellular	53.08	76.19
HORVU0Hr1G005570.3	Barley	cytosol	39.57	73.57
GSMUA_Achr10P...	Banana	plastid	68.72	69.05
KRH23699	Soybean	plastid	69.43	68.46
Solyc03g117850.2.1	Tomato	plastid	70.62	67.42
Os04t0658300-01	Rice	plastid	70.14	67.12
OQU82488	Sorghum	plastid	68.01	66.28
TraesCS2D01G501700.1	Wheat	plastid	67.54	64.19
TraesCS2B01G529300.1	Wheat	plastid	67.3	63.96
TraesCS2A01G501200.1	Wheat	plastid	66.82	63.66
Zm00001d001995_P003	Maize	plastid	68.48	62.83
CDX93240	Canola	plastid	41.71	40.09
CDY20474	Canola	plastid	41.47	37.39
CDX74838	Canola	plastid	41.23	37.18
CDY24950	Canola	plastid	41.0	36.42
CDY07640	Canola	plastid	41.0	36.42
CDY68720	Canola	cytosol	8.29	29.17
CDY21872	Canola	cytosol	8.77	28.91
CDY58991	Canola	cytosol	4.74	24.39

Protein Annotations

EnsemblPlants:CDX96450	EnsemblPlantsGene:GSBRNA2T00102620001	Gene3D:1.10.8.1070	Gene3D:3.40.50.300	GO:A0A078E3D6	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR32429
PANTHER:PTHR32429:SF11	PFAM:PF00004	ProteinID:CDX96450	ProteinID:CDX96450.1	SEG:seg	SUPFAM:SSF52540
UniParc:UPI0004EEA8F0	MapMan:35.1	:	:	:	:

Description

BnaA07g30610D

Coordinates

chrLK031894:-:893887..896342

Molecular Weight (calculated)

47527.9 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.404

Length

422 amino acids

Sequence
(BLAST)

001: MALTNISLRF KFPPLQSSTF NHTSRKPSSI ACSKAGDDGE KGAVDGGEKP RKLSEQSSWE VKDSEGKDYL YRLGAESENM NIAVGARAGM IDDVFIGDFL
101: GKDSDIVFDY RQKATRSFEH LQGDYYIAPT FMVIITSVHI VKNYLASSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL ESDRAGEPGR
201: LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQDWRDAD TVNRVPLIVT GNDFSRLYAP LIREGRMEKF
301: YWQPTREDIV NIVSRMYEKD GISRKDVVSI VDQFPNQALD FYGALRSRTY DRSILKWVDE VGGIETLEKT LLRRKKTKEV PQFIPPEQTV EALLESGYSL
401: IKEQKLINET KLSKEYMKNI DD

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.