Factsheet for Zm00001d001995_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82488	Sorghum	plastid	81.52	86.61
HORVU0Hr1G005570.3	Barley	cytosol	41.52	84.14
Os04t0658300-01	Rice	plastid	76.96	80.27
VIT_09s0018g01270.t01	Wine grape	extracellular	49.13	78.47
PGSC0003DMT400036879	Potato	extracellular	47.83	74.83
TraesCS2D01G501700.1	Wheat	plastid	71.74	74.32
TraesCS2B01G529300.1	Wheat	plastid	71.74	74.32
TraesCS2A01G501200.1	Wheat	plastid	71.52	74.27
GSMUA_Achr10P...	Banana	plastid	66.3	72.62
CDX96450	Canola	plastid	62.83	68.48
Bra016017.1-P	Field mustard	mitochondrion, plastid	62.39	68.17
KRH23699	Soybean	plastid	62.83	67.52
CDY59936	Canola	plastid	62.17	67.14
AT1G73110.1	Thale cress	plastid	62.61	66.67
Solyc03g117850.2.1	Tomato	plastid	62.17	64.71
Zm00001d048593_P001	Maize	plastid	41.74	44.34
Zm00001d048592_P001	Maize	plastid	41.52	41.25

Protein Annotations

Gene3D:1.10.8.1070	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6DVG1	InterPro:ATPase_AAA_core	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0016020	GO:GO:0016787	ProteinID:ONM12716.1	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR32429
PANTHER:PTHR32429:SF11	SUPFAM:SSF52540	UniParc:UPI0008435BCE	EnsemblPlantsGene:Zm00001d001995	EnsemblPlants:Zm00001d001995_P003	EnsemblPlants:Zm00001d001995_T003
SEG:seg	:	:	:	:	:

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein

Coordinates

chr2:+:4120298..4126906

Molecular Weight (calculated)

51717.8 Da

IEP (calculated)

6.728

GRAVY (calculated)

-0.346

Length

460 amino acids

Sequence
(BLAST)

001: MATTSVAASS PHPHLSRPRR RNSSATSRTS IRGCLLPIRC SSASSSQPPA TGGEEGESGR RRLSKQSSWE DRDVEGDDYL YRLGKEADNL NITVGARSGI
101: VDELFVGNFL GKDSDIVFDY RQKATRTFEY LQGDYYIAPA FLVSYFWYKI EQSITFDSLH PEIVVSFVLT QPILTCHIVK NYIAHLLNNI KVPLILGIWG
201: GKGQGKTFQT ELIFRAMGVE PVIMSAGELE SEKAGEPGRL IRDRYRTASQ VIQNQGKMSC LMINDLDAGV GRFGNTQMTV NNQIAVGTLM NLADNPTRVS
301: IGQKWRESDV THRVPIIVTG NDFSTLYAPL IRDGRMEKFY WQPNREDIIS IVHGMYIKDG LSVEEVSRIV DAFPNQALDF YGALRSRTYD QAILEWVEEI
401: GGHEQLNEKL LKRKKGEELP TFIPPKPTLE ALIESGYSLV KEQELIMSSK LSKEYMKNLE

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.