Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0018g01270.t01 | Wine grape | extracellular | 76.65 | 60.42 |
| PGSC0003DMT400036879 | Potato | extracellular | 74.45 | 57.48 |
| TraesCS2D01G501700.1 | Wheat | plastid | 97.8 | 50.0 |
| TraesCS2A01G501200.1 | Wheat | plastid | 97.36 | 49.89 |
| TraesCS2B01G529300.1 | Wheat | plastid | 97.36 | 49.77 |
| Os04t0658300-01 | Rice | plastid | 84.58 | 43.54 |
| OQU82488 | Sorghum | plastid | 82.82 | 43.42 |
| GSMUA_Achr10P... | Banana | plastid | 79.74 | 43.1 |
| Zm00001d001995_P003 | Maize | plastid | 84.14 | 41.52 |
| KRH23699 | Soybean | plastid | 77.09 | 40.89 |
| Bra016017.1-P | Field mustard | mitochondrion, plastid | 73.57 | 39.67 |
| CDX96450 | Canola | plastid | 73.57 | 39.57 |
| CDY59936 | Canola | plastid | 74.01 | 39.44 |
| AT1G73110.1 | Thale cress | plastid | 74.01 | 38.89 |
| Solyc03g117850.2.1 | Tomato | plastid | 75.33 | 38.69 |
| HORVU4Hr1G027260.12 | Barley | cytosol | 49.78 | 24.25 |
Protein Annotations
| Gene3D:1.10.8.1070 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287DWF9 | InterPro:ATPase_AAA_core | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
| EnsemblPlantsGene:HORVU0Hr1G005570 | EnsemblPlants:HORVU0Hr1G005570.3 | InterPro:P-loop_NTPase | PFAM:PF00004 | PANTHER:PTHR32429 | PANTHER:PTHR32429:SF11 |
| SUPFAM:SSF52540 | UniParc:UPI000B462B24 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:30719409..30723015
Molecular Weight (calculated)
25890.0 Da
IEP (calculated)
6.549
GRAVY (calculated)
-0.497
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: GEPGRLIRDR YRTASQVVQN QGKMSCLMIN DLDAGLGRFG NTQMTVNNQI VVGTLMNLAD NPNRVSVGQK WRESDITHRI PIIATGNDFS TLYAPLIRDG
101: RMEKFYWQPT REDIINIIHR MYTKDGLSLE EVSSIVDTFP NQALDFYGAL RSRTYDQAIL QWVNDIGGYE QLGEKLLKRK NREKLPTFIP PKPTLDALIQ
201: SGNSLVEEQA FVMNSNLSKE YMKNIDD
101: RMEKFYWQPT REDIINIIHR MYTKDGLSLE EVSSIVDTFP NQALDFYGAL RSRTYDQAIL QWVNDIGGYE QLGEKLLKRK NREKLPTFIP PKPTLDALIQ
201: SGNSLVEEQA FVMNSNLSKE YMKNIDD
001: MTLIVELTEL VYICEFAADI VFDYRQKATR SFEHLQGDYY IAPSFLDKVA VHIVKNYLAP SLNIKIPLIL GIWGGKGQGK TFQTELIFKT MGVEPVIMSA
101: GELESDRAGE PGRLIRDRYR TASQVIQNQG KMSVLMINDI DAGLGRFGET QMTVNNQIVV GTLMNLADNP TRVSVGQEWR EADMVNRVPL IVTGNDFSTL
201: YAPLIREGRM EKFYWQPTRE DIVNIVSRMY EKDGISRKDV ISIVDKFPNQ ALDFYGALRS RTYDRSILKW VDEAGGMETL GKVLLRRKKT QEVPQFTAPE
301: QTVEALLESG YSLINEQKLI METKLSKEYM KNMDD
101: GELESDRAGE PGRLIRDRYR TASQVIQNQG KMSVLMINDI DAGLGRFGET QMTVNNQIVV GTLMNLADNP TRVSVGQEWR EADMVNRVPL IVTGNDFSTL
201: YAPLIREGRM EKFYWQPTRE DIVNIVSRMY EKDGISRKDV ISIVDKFPNQ ALDFYGALRS RTYDRSILKW VDEAGGMETL GKVLLRRKKT QEVPQFTAPE
301: QTVEALLESG YSLINEQKLI METKLSKEYM KNMDD
Arabidopsis Description
At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.